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Artificial intelligence is brittle: we need to do better
Commentary in Radiol Artif Intell on "Artificial intelligence is brittle: we need to do better" by A Suri, W Hsu

Evidence of thalamocortical network activation during epileptic spasms: a thalamic stereotactic EEG study
Report in Epilepsia on "Evidence of thalamocortical network activation during epileptic spasms: a thalamic stereotactic EEG study" by A Daida, et al.

Identifying younger postmenopausal women with osteoporosis using USPSTF-recommended osteoporosis risk assessment tools
Report in JAMA Netw Open on "Identifying younger postmenopausal women with osteoporosis using USPSTF-recommended..." by HW Zheng, AAT Bui, et al.

Risk-stratified screening: a simulation study of scheduling templates on daily mammography recalls
Report in J Am Coll Radiol on "Risk-stratified screening: a simulation study of scheduling templates on daily mammography recalls" by Y Lin, AC Hoyt, et al

A comparative analysis of image harmonization techniques in mitigating differences in CT acquisition and reconstruction
Report in Phys Med Biol on "A comparative analysis of image harmonization techniques in mitigating differences..." by A Yadav, S Welland, JM Hoffman, et al
2025 Publications

Journal article published in NPJ Digital Medicine by Samir Akre, et al.
Report in NPJ Digital Medicine on self-reported sleep metrics vs. sensor-based evaluations by Akre et al.

Advancing precision oncology through modeling of longitudinal and multimodal data
Preprint in ArXiv on "Advancing precision oncology through modeling of longitudinal and multimodal data" by L Zhuang, SH Park, SJ Skates, et al.

Comparing P300 flashing paradigms in online typing with language models
Report in PLoS One on "Comparing P300 flashing paradigms in online typing with language models" by N Chandravadia, S Pendekanti, D Roberts, R Tran, et al.

Mini-seizures: novel interictal iEEG biomarker capturing synchronization network dynamics at the epileptogenic zone
Preprint in medRxiv on "Mini-seizures: novel interictal iEEG biomarker capturing synchronization network dynamics..." by T Monsoor, S Kania, A Daida, et al

Parent-reported usability of a patient portal-based asthma care tool for parents of children with asthma
Report in Pediatr Pulmonol on "Parent-reported usability of a patient portal-based asthma care tool for parents of children with asthma" by MK Ross, et al.

Fast ripple band high-frequency activity associated with thalamic sleep spindles in pediatric epilepsy
Report in Clin Neurophysiol on "Fast ripple band high-frequency activity associated with thalamic sleep spindles in pediatric epilepsy" by A Daida, et al.

Health equity and artificial intelligence in nephrology
Report in Clin J Am Soc Nephrol on "Health equity and artificial intelligence in nephrology" by AE Hercz, SB Nicholas, AAT Bui, KC Norris

External validation of a commercial artificial intelligence algorithm on a diverse population for detection of false negative breast cancers
Report in J Breast Imaging on "External validation of a commercial artificial intelligence algorithm on a diverse population..." by SR Plimpton, et al.

Observational study of sudden cardiac arrest risk (OSCAR): rationale and design of an electronic health records cohort
Report in Int J Cardiol Heart Vas on "Observational study of sudden cardiac arrest risk (OSCAR): Rationale and design..." by K Reinier, HS Chugh, et al.

Publication in Abdominal Radiology (January 2025)
Report in Abdom Radiol on "Performance of MR fusion biopsy, systematic biopsy and combined biopsy on prostate cancer detection..." HH Riskin-Jones, et al.

Increasing adherence and collecting symptom-specific biometric signals in remote monitoring of heart failure patients: a randomized controlled trial
Report in JAMIA on "Increasing adherence and collecting symptom-specific biometric signals in remote monitoring of heart failure..." by S Mohapatra, et al.

Investigating MRI‐associated biological aspects of racial disparities in prostate cancer for African American and white men
Report in J Magn Reson Imaging on "Investigating MRI‐associated biological aspects of racial disparities in prostate cancer..." by F Zabihollahy, et al.

Quantitative 3-T multiparametric MRI parameters as predictors of aggressive prostate cancer
Report in Radiol Imaging Cancer on "Quantitative 3-T multiparametric MRI parameters as predictors of aggressive prostate cancer" by DHS Kim, I Sonni, et al
2024 Publications

Uncovering spatiotemporal dynamics of the corticothalamic network during seizures
Report in Epilepsia on "Uncovering Spatiotemporal Dynamics of the Corticothalamic Network during Seizures" by S Panchavati, A Daida, B Edmonds, et al.

From bench-to-bedside: how artificial intelligence is changing thyroid nodule diagnostics, a systematic review
Report in JCEM on "AI is Changing Thyroid Nodule Diagnostics" by Vivek R Sant, Ashwath Radhachandran, Vedrana Ivezic, Denise T Lee, Masha J Livhits

Left Ventricular Rupture after Acute Myocardial Infarction
Report in Radiology on "Left Ventricular Rupture after Acute Myocardial Infarction" by Prosper AE and Hassani C.

Paper published in SPIE Proceedings on assessing variability in non-contrast CT
Research paper published in SPIE Proceedings with accompanying presentation at Medical Imaging 2024: Computer-Aided Diagnosis

Early prediction of end-stage kidney disease using electronic health record data: a machine learning approach with a 2-year horizon
Report in JAMIA Open on Early prediction of end-stage kidney disease by Panayiotis Petousis, James M Wilson , Alex V Gelvezon, Shafiul Alam, Ankur Jain

ACR Lung-RADS v2022: assessment categories and management recommendations
Report in chest on ACR Lung-RADS v2022: Assessment Categories and Management Recommendations by J Christensen, AE Prosper, CC Wu, J Chung

A multitask approach for automated detection and segmentation of thyroid nodules in ultrasound images
Report in Computer in Biology Medicine thyroid nodules in ultrasound images by Ashwath Radhachandran, Adam Kinzel, Joseph Chen, Vivek Sant, Maitraya Patel

Treating rare tumors with liver transplantation
Report in Curr Opin Organ Transplant on Treating rare tumors with liver transplantation by A Melehy & V Agopian

Transportability analysis-a tool for extending trial results to a representative target population
Report in jama network open transportability analysis by K Inoue and W Hsu

Comparing lung cancer screening using transportability methods for the NLST
Report in JAMA Network Open on "Comparing Lung Cancer Screening Strategies"

Publication in Open Forum Infectious Diseases (Vol. 11, No. 2)
Report in Open Forum Infectious Diseases by D Goodman-Meza, et al.

Towards a framework for interoperability & reproducibility of predictive models
Publication in Journal of Biomedical Informatics by A Rahrooh, AO Garlid, K Bartlett, W Coons, P Petousis, W Hsu, AAT Bui

Patient-level thyroid cancer classification using attention multiple instance learning on fused multi-scale ultrasound image features
Report in AMIA Symposium on Patient-level thyroid cancer classification by L Zhuang, V Ivezic, J Feng, C Shen

Evaluating deep learning performance for P300 neural signal classification
Report in amia symposium on Evaluating Deep Learning Performance for P300 Neural Signal Classification by Y Ravipati, N Pouratian, C Arnold, W Speier

Perspectives, experiences, and concerns with cyclical vomiting syndrome: Insights from online targeted-disease forums
Report in Neurogastroenterology & Motility on cyclical vomiting syndrome by C Khalil, CV Almario, C Arnold
- Suri A, Hsu W. Artificial Intelligence Is Brittle: We Need to Do Better. Radiol Artif Intell. 2025 Apr 9;7(3):e250081. doi: 10.1148/ryai.250081. PMID: 40202405.
- Daida A, Panchavati S, Oana S, Kanai S, Zhang Y, Ding Y, Rajsekar RR, Salamon N, Sankar R, Fallah A, Hussain SA, Roychowdhury V, Speier W, Nariai H. Evidence of thalamocortical network activation during epileptic spasms: A thalamic stereotactic EEG study. Epilepsia. 2025 Mar 7. doi: 10.1111/epi.18349. Epub ahead of print. PMID: 40053323.
- Zheng HW, Bui AAT, Ensrud KE, Wright NC, Manson JE, Watts NB, Johnson KC, Shadyab AH, Crandall CJ (2025). Identifying Younger Postmenopausal Women With Osteoporosis Using USPSTF-Recommended Osteoporosis Risk Assessment Tools. JAMA Netw Open, 8(3):e250626. Epub date: 2025 Mar 03. doi.org/10.1001/jamanetworkopen.2025.0626. PMID: 40100219. PMCID: PMC11920839
- Lin Y, Hoyt AC, Manuel VG, Inkelas M, Ayvaci MUS, Ahsen ME, Hsu W. Risk-Stratified Screening: A Simulation Study of Scheduling Templates on Daily Mammography Recalls. J Am Coll Radiol. 2025 Mar;22(3):297-306. doi: 10.1016/j.jacr.2024.12.010. PMID: 40044308; PMCID: PMC11925393.
- Yadav A, Welland S, Hoffman JM, Hyun J Kim G, Brown MS, Prosper AE, Aberle DR, McNitt-Gray MF, Hsu W. A comparative analysis of image harmonization techniques in mitigating differences in CT acquisition and reconstruction. Phys Med Biol. 2025 Feb 27;70(5):055015. doi: 10.1088/1361-6560/adabad. PMID: 39823753; PMCID: PMC11866762.
- Zhuang L, Park SH, Skates SJ, Prosper AE, Aberle DR, Hsu W. Advancing Precision Oncology Through Modeling of Longitudinal and Multimodal Data. ArXiv [Preprint]. 2025 Feb 11:arXiv:2502.07836v1. PMID: 39990791; PMCID: PMC11844620.
- Akre S, Cohen ZD, Welborn A, Zbozinek TD, Balliu B, Craske MG, Bui AAT (2025). Comparing self reported and physiological sleep quality from consumer devices to depression and neurocognitive performance. NPJ Digit Med, 8(1):92. Epub date: 2025 Feb 09. doi.org/10.1038/s41746-025-01493-6. PMID: 39924572. PMCID: PMC11808080.
- Chandravadia N, Pendekanti S, Roberts D, Tran R, Panchavati S, Arnold C, Pouratian N, Speier W. Comparing P300 flashing paradigms in online typing with language models. PLoS One. 2025 Feb 3;20(2):e0303390. doi: 10.1371/journal.pone.0303390. PMID: 39899514; PMCID: PMC11790102.
- Monsoor T, Kanai S, Daida A, Kuroda N, Sinha P, Oana S, Zhang Y, Liu L, Singh G, Duan C, Sim MS, Fallah A, Speier W, Asano E, Roychowdhury V, Nariai H. Mini- Seizures: Novel Interictal iEEG Biomarker Capturing Synchronization Network Dynamics at the Epileptogenic Zone. medRxiv [Preprint]. 2025 Feb 2:2025.01.31.25321482. doi: 10.1101/2025.01.31.25321482. PMID: 39974054; PMCID: PMC11838652.
- Ross MK, Clark EJ, Chan W, Kafashzadeh D, Radparvar I, Gao E, Gomez A, Tran M, Sim MS, Rong G, Friedman S, Szilagyi PG, Ryan G, Bui AAT. Parent-Reported Usability of a Patient Portal-Based Asthma Care Tool for Parents of Children With Asthma. Pediatr Pulmonol. 2025 Feb;60(2):e27509. doi: 10.1002/ppul.27509. PMID: 39912508; PMCID: PMC11800319.
- Daida A, Ding Y, Zhang Y, Oana S, Panchavati S, Edmonds BD, Ahn SS, Salamon N, Sankar R, Fallah A, Staba RJ, Engel J Jr, Speier W, Roychowdhury V, Nariai H. Fast ripple band high-frequency activity associated with thalamic sleep spindles in pediatric epilepsy. Clin Neurophysiol. 2025 Jan 30:S1388-2457(25)00030-6. doi: 10.1016/j.clinph.2025.01.011. Epub ahead of print. PMID: 39915224.
- Engel Hercz A, Nicholas SB, Bui AAT, Norris KC (2025). Health Equity and Artificial Intelligence in Nephrology. Clin J Am Soc Nephrol Epub date: 2025 Jan 28. doi.org/10.2215/cjn.0000000673. PMID: 39874085.
- Plimpton SR, Milch H, Sears C, Chalfant J, Hoyt A, Fischer C, Hsu W, Joines M. External Validation of a Commercial Artificial Intelligence Algorithm on a Diverse Population for Detection of False Negative Breast Cancers. J Breast Imaging. 2025 Jan 25;7(1):16-26. doi: 10.1093/jbi/wbae058. PMID: 39401322; PMCID: PMC11770225.
- Reinier K, Chugh HS, Uy-Evanado A, Heckard E, Mathias M, Bosson N, Calsavara VF, Slomka PJ, Elashoff DA, Bui AAT, Chugh SS. Observational study of sudden cardiac arrest risk (OSCAR): Rationale and design of an electronic health records cohort. Int J Cardiol Heart Vasc. 2025 Jan 19;56:101614. doi: 10.1016/j.ijcha.2025.101614. PMID: 39897418; PMCID: PMC11787554.
- Riskin-Jones HH, Raman AG, Kulkarni R, Arnold CW, Sisk A, Felker E, Lu DS, Marks LS, Raman SS. Performance of MR fusion biopsy, systematic biopsy and combined biopsy on prostate cancer detection rate in 1229 patients stratified by PI-RADSv2 score on 3T multi-parametric MRI. Abdom Radiol (NY). 2025 Jan 18. doi: 10.1007/s00261-024-04753-3. Epub ahead of print. PMID: 39825007.
- Mohapatra S, Issa M, Ivezic V, Doherty R, Marks S, Lan E, Chen S, Rozett K, Cullen L, Reynolds W, Rocchio R, Fonarow GC, Ong MK, Speier WF, Arnold CW. Increasing adherence and collecting symptom-specific biometric signals in remote monitoring of heart failure patients: a randomized controlled trial. J Am Med Inform Assoc. 2025 Jan 1;32(1):181-192. doi: 10.1093/jamia/ocae221. PMID: 39172649; PMCID: PMC11648719.
- Zabihollahy F, Miao Q, Naim S, Sonni I, Vangala S, Kim H, Hsu W, Sisk A, Reiter R, Raman SS, Sung K. Investigating MRI-Associated Biological Aspects of Racial Disparities in Prostate Cancer for African American and White Men. J Magn Reson Imaging. 2025 Jan;61(1):121-131. doi: 10.1002/jmri.29397. Epub 2024 May 15. PMID: 38751322; PMCID: PMC11564416.
- Kim DHS, Sonni I, Grogan T, Sisk A, Murthy V, Hsu W, Sung K, Lu DS, Reiter RE, Raman SS. Quantitative 3-T Multiparametric MRI Parameters as Predictors of Aggressive Prostate Cancer. Radiol Imaging Cancer. 2025 Jan;7(1):e240011. doi: 10.1148/rycan.240011. PMID: 39750113; PMCID: PMC11791667.
- Akre S, Seok D, Douglas C, Aguilera A, Carini S, Dunn J, Hotopf M, Mohr DC, Bui AAT, Freimer NB. Advancing digital sensing in mental health research. NPJ Digit Med. 2024 Dec 18;7(1):362. doi: 10.1038/s41746-024-01343-x. PMID: 39695319; PMCID: PMC11655837.
- Sonni I, Weiner AB, Doddipalli S, Deol M, Ban D, Kim HO, Grogan T, Ahuja P, Barroso N, Zong Y, Soin P, Sisk A, Czernin J, Hsu W, Calais J, Reiter RE, Raman SS. Clinical, Pathologic, and Imaging Variables Associated with Prostate Cancer Detection by PSMA PET/CT and Multiparametric MRI. J Nucl Med. 2024 Dec 3;65(12):1923-1931. doi: 10.2967/jnumed.124.268443. PMID: 39477501.
- Prosper AE, Lin Y, Aberle DR. Lung cancer screening with low-dose computed tomography-where do we go from here? J Natl Cancer Inst. 2024 Dec 1;116(12):1878-1881. doi: 10.1093/jnci/djae197. PMID: 39283712; PMCID: PMC11630503.
- Zhuang L, Yadav A, Kim GH, Mohammad Hossein Tabatabaei S, Prosper A, Hsu W. Exploring the Impact of Acquisition and Reconstruction Parameters on an Imaging-Based Lung Cancer Risk Model. Annu Int Conf IEEE Eng Med Biol Soc. 2024 Jul;2024:1-5. doi: 10.1109/EMBC53108.2024.10781833. PMID: 40039084.
- Lin Y, Hoyt AC, Manuel VG, Inkelas M, Hsu W. Using Discrete Event Simulation to Design and Assess an AI-aided Workflow for Same-day Diagnostic Testing of Women Undergoing Breast Screening. AMIA Jt Summits Transl Sci Proc. 2024 May 31;2024:314-323. PMID: 38827101; PMCID: PMC11141813.
- Ding R, Hall J, Tenenholtz N, Severson K. Improving mitosis detection on histopathology images using large vision-language models. IEEE International Symposium on Biomedical Imaging (ISBI). 2024 May 27; 2024: 1-5. doi: 10.1109/ISBI56570.2024.10635613
- Ramwala OA, Lowry KP, Cross NM, Hsu W, Austin CC, Mooney SD, Lee CI. Establishing a Validation Infrastructure for Imaging-Based Artificial Intelligence Algorithms Before Clinical Implementation. J Am Coll Radiol. 2024 Oct;21(10):1569-1574. doi: 10.1016/j.jacr.2024.04.027. Epub 2024 May 22. PMID: 38789066; PMCID: PMC11486600.
- Zabihollahy F, Miao Q, Naim S, Sonni I, Vangala S, Kim H, Hsu W, Sisk A, Reiter R, Raman SS, Sung K. Investigating MRI-Associated Biological Aspects of Racial Disparities in Prostate Cancer for African American and White Men. J Magn Reson Imaging. 2025 Jan;61(1):121-131. doi: 10.1002/jmri.29397. Epub 2024 May 15. PMID: 38751322; PMCID: PMC11564416.
- Zhu Y, Zhuang L, Lin Y, Zhang T, Tabatabaei H, Aberle DR, Prosper AE, Chien A, Hsu W. DART: Deformable Anatomy-Aware Registration Toolkit for Lung Ct Registration with Keypoints Supervision. Proc IEEE Int Symp Biomed Imaging. 2024 May;2024:10.1109/ISBI56570.2024.10635326. doi: 10.1109/ISBI56570.2024.10635326. Epub 2024 Aug 22. PMID: 39309597; PMCID: PMC11412684.
- Prosper AE, Hassani C. Left Ventricular Rupture after Acute Myocardial Infarction. Radiology. 2024 Apr;311(1):e232257. doi.org/10.1148/radiol.232257. PMID: 38652026.
- Sant VR, Radhachandran A, Ivezic V, Lee DT, Livhits MJ, Wu JX, Masamed R, Arnold CW, Yeh MW, Speier W. From Bench-to-Bedside: How Artificial Intelligence Is Changing Thyroid Nodule Diagnostics. J Clin Endocrinol Metab. 2024 Apr 29:dgae277. doi.org/10.1210/clinem/dgae277. Epub ahead of print. PMID: 38679750.
- Panchavati S, Daida A, Edmonds B, Miyakoshi M, Oana S, Ahn SS, Arnold C, Salamon N, Sankar R, Fallah A, Speier W, Nariai H. Uncovering spatiotemporal dynamics of the corticothalamic network at ictal onset. Epilepsia. 2024 Apr 25. doi.org/10.1111/epi.17990. Epub ahead of print. PMID: 38662128.
- Warner E, Lee J, Hsu W, Syeda-Mahmood T, Kahn CE Jr, Gevaert O, Rao A. Multimodal Machine Learning in Image-Based and Clinical Biomedicine: Survey and Prospects. Int J Comput Vis. 2024;132(9):3753-3769. doi: 10.1007/s11263-024-02032-8. Epub 2024 Apr 23. PMID: 39211895; PMCID: PMC11349845.
- Radhachandran A, Kinzel A, Chen J, Sant V, Patel M, Masamed R, Arnold CW, Speier W. A multitask approach for automated detection and segmentation of thyroid nodules in ultrasound images. Comput Biol Med. 2024 Mar;170:107974. doi.org/10.1016/j.compbiomed.2024.107974. Epub 2024 Jan 12. PMID: 38244471.
- Petousis P, Wilson JM, Gelvezon AV, Alam S, Jain A, Prichard L, Elashoff DA, Raja N, Bui AAT. Early prediction of end-stage kidney disease using electronic health record data: a machine learning approach with a 2-year horizon. JAMIA Open. 2024 Feb 27;7(1):ooae015. doi.org/10.1093/jamiaopen/ooae015. PMID: 38414534; PMCID: PMC10898824.
- Melehy A, Agopian V. Treating rare tumors with liver transplantation. Curr Opin Organ Transplant. 2024 Feb 1;29(1):30-36. doi.org/10.1097/MOT.0000000000001118. Epub 2023 Oct 18. PMID: 37851086.
- Welland SH, Kim GHJ, Yadav A, Hoffman JM, Hsu W, Brown MS, Tavakkol E, Nael K, McNitt-Gray MF. Assessing variability in non-contrast CT for the evaluation of stroke: The effect of CT image reconstruction conditions on AI-based CAD measurements of ASPECTS value and hypodense volume. Proc SPIE Int Soc Opt Eng. 2024 Feb;12927:1292711. doi.org/10.1117/12.3006582. Epub 2024 Apr 3. PMID: 38645463; PMCID: PMC11027162.
- Christensen J, Prosper AE, Wu CC, Chung J, Lee E, Elicker B, Hunsaker AR, Petranovic M, Sandler KL, Stiles B, Mazzone P, Yankelevitz D, Aberle D, Chiles C, Kazerooni E. ACR Lung-RADS v2022: Assessment Categories and Management Recommendations. Chest. 2024 Mar;165(3):738-753. doi.org/10.1016/j.chest.2023.10.028. Epub 2024 Jan 30. PMID: 38300206.
- Goodman-Meza D, Goto M, Salimian A, Shoptaw S, Bui AAT, Gordon AJ, Goetz MB. Impact of Potential Case Misclassification by Administrative Diagnostic Codes on Outcome Assessment of Observational Study for People Who Inject Drugs. Open Forum Infect Dis. 2024 Jan 16;11(2):ofae030. doi.org/10.1093/ofid/ofae030. PMID: 38379573; PMCID: PMC10878055.
- Zhuang L, Ivezic V, Feng J, Shen C, Radhachandran A, Sant V, Patel M, Masamed R, Arnold C, Speier W. Patient-level thyroid cancer classification using attention multiple instance learning on fused multi-scale ultrasound image features. AMIA Annu Symp Proc. 2024 Jan 11;2023:1344-1353. PMID: 38222341; PMCID: PMC10785838.
- Ravipati Y, Pouratian N, Arnold CW, Speier W. Evaluating Deep Learning Performance for P300 Neural Signal Classification. AMIA Annu Symp Proc. 2024 Jan 11;2023:1218-1225. PMID: 38222383; PMCID: PMC10785884.
- Inoue K, Hsu W. Transportability Analysis-A Tool for Extending Trial Results to a Representative Target Population. JAMA Netw Open. 2024 Jan 2;7(1):e2346302. doi.org/10.1001/jamanetworkopen.2023.46302. PMID: 38289608.
- Robertson SE, Joyce NR, Steingrimsson JA, Stuart EA, Aberle DR, Gatsonis CA, Dahabreh IJ. Comparing Lung Cancer Screening Strategies in a Nationally Representative US Population Using Transportability Methods for the National Lung Cancer Screening Trial. JAMA Netw Open. 2024 Jan 2;7(1):e2346295. doi.org/10.1001/jamanetworkopen.2023.46295. PMID: 38289605; PMCID: PMC10828917.
- Rahrooh A, Garlid AO, Bartlett K, Coons W, Petousis P, Hsu W, Bui AAT. Towards a framework for interoperability and reproducibility of predictive models. J Biomed Inform. 2024 Jan;149:104551. doi.org/10.1016/j.jbi.2023.104551. Epub 2023 Nov 23. PMID: 38000765.
- Khalil C, Almario CV, Dupuy T, Arnold CW, Chen YJ, Spiegel BMR. Perspectives, experiences, and concerns with cyclical vomiting syndrome: Insights from online targeted-disease forums. Neurogastroenterol Motil. 2024 Feb;36(2):e14712. doi.org/10.1111/nmo.14712. Epub 2024 Jan 8. PMID: 38191754.
- Avra T, Cowan A, Fukushima J, Friedman J. Medical Student-Led Initiative to Incorporate Harm Reduction into Medical School Curriculum. Acad Psychiatry. 2023 Dec;47(6):698-699. https://doi.org/10.1007/s40596-023-01768-8. Epub 2023 Mar 23. PMID: 36952216.
- Shehadeh A, Feng J, Selde W, Billian J, Mastenbrook J. Higher Prehospital Blood Glucose Levels Associated With Return of Spontaneous Circulation in Out-of-Hospital Non-traumatic Cardiac Arrests. Air Med J. 2023 Nov-Dec;42(6):471-476. https://doi.ord/10.1016/j.amj.2023.09.003. Epub 2023 Sep 23. PMID: 37996185.
- Rahrooh A, Garlid AO, Bartlett K, Coons W, Petousis P, Hsu W, Bui AAT. Towards a framework for interoperability and reproducibility of predictive models. J Biomed Inform. 2024 Jan;149:104551. https://doi.org/10.1016/j.jbi.2023.104551. Epub 2023 Nov 23. PMID: 38000765.
- Khalil C, van Deen WK, Dupuy T, Syal G, Arnold CW, Cazzetta SE, Nazarey PP, Almario CV, Spiegel BMR. Patients' Perspectives, Experiences, and Concerns With Perianal Fistulae: Insights From Online Targeted-Disease Forums. Crohns Colitis 360. 2023 Nov 15;5(4):otad073. https://doi.org/10.1093/crocol/otad073. PMID: 38046445; PMCID: PMC10693318.
- Chiang J, Rajendran PS, Hao F, Sayre J, Raman SS, Lu DSK, McWilliams JP. Combination transarterial chemoembolization and microwave ablation vs. microwave ablation monotherapy for hepatocellular carcinomas greater than 3 cm: a comparative study. Diagn Interv Radiol. 2023 Nov 7;29(6):805-812. https://doi.org/10.4274/dir.2023.232159. Epub 2023 Sep 4. PMID: 37665139; PMCID: PMC10679555.
- Gibson D, Tran T, Raveendran V, Bonnet C, Siu N, Vinet M, Stoddard-Bennett T, Arnold C, Deng SX, Speier W. Latent diffusion augmentation enhances deep learning analysis of neuro-morphology in limbal stem cell deficiency. Front Med (Lausanne). 2023 Oct 16;10:1270570. https://doi.org/10.3389/fmed.2023.1270570. PMID: 37908848; PMCID: PMC10613638.
- Pelletier AR, Steinecke D, Sigdel D, Adam I, Caufield JH, Guevara-Gonzalez V, Ramirez J, Verma A, Bali K, Downs K, Wang W, Bui AAT, Ping P. A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports. J Vis Exp. 2023 Oct 13;(200). https://doi.org/10.3791/65084. PMID: 37902366.
- Shah NP, García-Gutiérrez V, Jiménez-Velasco A, Larson SM, Saussele S, Rea D, Mahon FX, Levy MY, Gómez-Casares MT, Mauro MJ, Sy O, Martin-Regueira P, Lipton JH. Treatment-free remission after dasatinib in patients with chronic myeloid leukaemia in chronic phase with deep molecular response: Final 5-year analysis of DASFREE. Br J Haematol. 2023 Sep;202(5):942-952. https://doi.org/10.1111/bjh.18883. Epub 2023 May 29. PMID: 37246588; PMCID: PMC10524617.
- Monsoor T, Zhang Y, Daida A, Oana S, Lu Q, Hussain SA, Fallah A, Sankar R, Staba RJ, Speier W, Roychowdhury V, Nariai H. Optimizing detection and deep learning-based classification of pathological high-frequency oscillations in epilepsy. Clin Neurophysiol. 2023 Oct;154:129-140. https://doi.org/10.1016/j.clinph.2023.07.012. Epub 2023 Aug 9. PMID: 37603979; PMCID: PMC10861270.
- Panchavati S, Daida A, Edmonds B, Miyakoshi M, Oana S, Ahn SS, Arnold C, Salamon N, Sankar R, Fallah A, Speier W, Nariai H. Uncovering Spatiotemporal Dynamics of the Corticothalamic Network during Seizures. medRxiv [Preprint]. 2023 Aug 22:2023.08.21.23294382. https://doi.org/10.1101/2023.08.21.23294382. PMID: 37662245; PMCID: PMC10473800.
- Khoo A, Govindarajan M, Qiu Z, Liu LY, Ignatchenko V, Waas M, Macklin A, Keszei A, Main BP, Yang L, Lance RS, Downes MR, Semmes OJ, Vesprini D, Liu SK, Nyalwidhe JO, Boutros PC, Kislinger T. Prostate Cancer Reshapes the Secreted and Extracellular Vesicle Urinary Proteomes. bioRxiv [Preprint]. 2023 Jul 25:2023.07.23.550214. https://doi.org/10.1101/2023.07.23.550214. PMID: 37546794; PMCID: PMC10402038.
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