Archive

• Taft DH, Akre S, Madrid N, Knoesen A, Mills DA, Lewis ZT. Resident microbes of lactation rooms and daycares. PeerJ. 2019 Dec 13;7:e8168. DOI: 10.7717/peerj.8168. PMID: 31844574; PMCID: PMC6913265.
• Norris KC, Duru OK, Alicic RZ, Daratha KB, Nicholas SB, McPherson SM, Bell DS, Shen JI, Jones CR, Moin T, Waterman AD, Neumiller JJ, Vargas RB, Bui AAT, Mangione CM, Tuttle KR; CURE-CKD investigators. Rationale and design of a multicenter Chronic Kidney Disease (CKD) and at-risk for CKD electronic health records-based registry: CURE-CKD. BMC Nephrol. 2019 Nov 20;20(1):416. doi: 10.1186/s12882-019-1558-9. PMID: 31747918; PMCID: PMC6868861.
• Goodman-Meza D, Weiss RE, Gamboa S, Gallegos A, Bui AAT, Goetz MB, Shoptaw S, Landovitz RJ. Long term surgical outcomes for infective endocarditis in people who inject drugs: a systematic review and meta-analysis. BMC Infect Dis. 2019 Nov 8;19(1):918. doi: 10.1186/s12879-019-4558-2. PMID: 31699053; PMCID: PMC6839097.
• Li W, Wang Z, Yue Y, Li J, Speier W, Zhou M, Arnold CW. Semi-supervised Learning using Adversarial Training with Good and Bad Samples. arXiv preprint arXiv:1910.08540. 2019 Oct 18.
• Hosseini A, Zamanzadeh D, Valencia L, Habre R, Bui AAT, Sarrafzadeh M. Domain Adaptation in Children Activity Recognition. Annu Int Conf IEEE Eng Med Biol Soc. 2019 Jul;2019:1725-1728. doi: 10.1109/EMBC.2019.8857135. PMID: 31946230.
• Munden RF, Chiles C, Boiselle PM, Sicks JD, Aberle DR, Gatsonis CA. Micronodules Detected on Computed Tomography During the National Lung Screening Trial: Prevalence and Relation to Positive Studies and Lung Cancer. J Thorac Oncol. 2019 Sep;14(9):1538-1546. DOI: 10.1016/j.jtho.2019.05.045. Epub 2019 Jul 8. PMID: 31295576; PMCID: PMC6708760.
• Zhu B, Hsu W, Bui AAT. A Platform for Searching Clinical Documents and Medical Images to Facilitate AI/ML Development. Conference on Machine Intelligence in Medical Imaging 2019. Austin, Texas. September 22-23, 2019.
• Petousis P, Winter A, Speier W, Aberle DR, Hsu W, Bui AAT. Using Sequential Decision Making to Improve Lung Cancer Screening Performance. IEEE Access. 2019;7:119403-119419. doi: 10.1109/ACCESS.2019.2935763. Epub 2019 Aug 16. PMID: 32754420; PMCID: PMC7402617.
• Shen S, Han SX, Aberle DR, Bui AAT, Hsu W. An Interpretable Deep Hierarchical Semantic Convolutional Neural Network for Lung Nodule Malignancy Classification. Expert Syst Appl. 2019 Aug 15;128:84-95. DOI: 10.1016/j.eswa.2019.01.048. Epub 2019 Jan 18. PMID: 31296975; PMCID: PMC6623975.
• Omigbodun AO, Noo F, McNitt-Gray M, Hsu W, Hsieh SS. The effects of physics-based data augmentation on the generalizability of deep neural networks: Demonstration on nodule false-positive reduction. Med Phys. 2019 Oct;46(10):4563-4574. DOI: 10.1002/mp.13755. Epub 2019 Aug 27. PMID: 31396974.
• Wibulpolprasert P, Raman SS, Hsu W, Margolis DJA, Asvadi NH, Khoshnoodi P, Moshksar A, Tan N, Ahuja P, Maehara CK, Huang J, Sayre J, Lu DSK, Reiter RE. Detection and Localization of Prostate Cancer at 3-T Multiparametric MRI Using PI-RADS Segmentation. AJR Am J Roentgenol. 2019 Apr 17:W1-W10. DOI: 10.2214/AJR.18.20113. Epub ahead of print. PMID: 30995090.
• Rajamani A, Borkowski K, Akre S, Fernandez A, Newman JW, Simon SI, Passerini AG.Oxylipins in triglyceride-rich lipoproteins of dyslipidemic subjects promote endothelial inflammation following a high fat meal. Sci Rep. 2019 Jun 17;9(1):8655. DOI: 10.1038/s41598-019-45005-5. PMID: 31209255; PMCID: PMC6572825.
• Meng Y, Speier W, Shufelt C, Joung S, E Van Eyk J, Bairey Merz CN, Lopez M, Spiegel B, Arnold CW. A Machine Learning Approach to Classifying Self-Reported Health Status in a Cohort of Patients With Heart Disease Using Activity Tracker Data. IEEE J Biomed Health Inform. 2020 Mar;24(3):878-884. DOI: 10.1109/JBHI.2019.2922178. Epub 2019 Jun 11. PMID: 31199276; PMCID: PMC6904535.
• Li J, Li W, Gertych A, Knudsen BS, Speier W, Arnold CW. An attention-based multi-resolution model for prostate whole slide image classification and localization. arXiv preprint arXiv:1905.13208. 2019 May 30.
• Schabath MB, Aberle DR. MILD trial, strong confirmation of lung cancer screening efficacy. Nat Rev Clin Oncol. 2019 Sep;16(9):529-530. DOI: 10.1038/s41571-019-0231-3. PMID: 31118491.
• Li W, Wang Z, Li J, Polson J, Speier W, Arnold CW. Semi-supervised learning based on generative adversarial network: a comparison between good GAN and bad GAN approach. arXiv preprint arXiv:1905.06484. 2019 May 16.
• Sohn A, Speier W, Lan E, Aoki K, Fonarow G, Ong M, Arnold CW. Assessment of Heart Failure Patients’ Interest in Mobile Health Apps for Self-Care: Survey Study. JMIR Cardio. 2019 Oct 29;3(2):e14332. DOI: 10.2196/14332. PMID: 31758788; PMCID: PMC6851712.
• Johnson DC, Raman SS, Mirak SA, Kwan L, Bajgiran AM, Hsu W, Maehara CK, Ahuja P, Faiena I, Pooli A, Salmasi A, Sisk A, Felker ER, Lu DSK, Reiter RE. Detection of Individual Prostate Cancer Foci via Multiparametric Magnetic Resonance Imaging. Eur Urol. 2019 May;75(5):712-720. DOI: 10.1016/j.eururo.2018.11.031. Epub 2018 Dec 1. PMID: 30509763.
• Winter A, Aberle DR, Hsu W. External validation and recalibration of the Brock model to predict probability of cancer in pulmonary nodules using NLST data. Thorax. 2019 Jun;74(6):551-563. DOI: 10.1136/thoraxjnl-2018-212413. Epub 2019 Mar 21. PMID: 30898897.
• Frangou E, Varnavidou-Nicolaidou A, Petousis P, Soloukides A, Theophanous E, Savva I, Michael N, Toumasi E, Georgiou D, Stylianou G, Mean R, Anastasiadou N, Athanasiou Y, Zavros M, Kyriacou K, Deltas C, Hadjianastassiou V. Clinical course and outcome after kidney transplantation in patients with C3 glomerulonephritis due to CFHR5 nephropathy. Nephrol Dial Transplant. 2019 Oct 1;34(10):1780-1788. DOI: 10.1093/ndt/gfz021. PMID: 30844074.
• Gaonkar B, Beckett J, Villaroman D, Ahn C, Edwards M, Moran S, Attiah M, Babayan D, Ames C, Villablanca JP, Salamon N, Bui AAT, Macyszyn L. Quantitative Analysis of Neural Foramina in the Lumbar Spine: An Imaging Informatics and Machine Learning Study. Radiol Artif Intell. 2019 Mar 6;1(2):180037. doi: 10.1148/ryai.2019180037. PMID: 33937788; PMCID: PMC8017393.
• Van Horn J, Abe S, Ambite JL, Atwood TK, Beard N, Bellis L, Bhattrai A, Bui AAT, Burns G, Fierro L, Gordon J, Grethe J, Kamdar J, Lei X, Leman K, McGrath A, Mulder N, O’Driscoll C, Stewart C, Tyagi S. Advancing the international data science workforce through shared training and education. F1000 Research, Open Science, 2019. doi: 10.12688/f1000research.18357.1.
• Petousis P, Han SX, Hsu W, Bui AAT. Generating Reward Functions Using IRL Towards Individualized Cancer Screening. Artif Intell Health (2018). 2019;11326:213-227. DOI: 10.1007/978-3-030-12738-1_16. Epub 2019 Feb 21. PMID: 31363717; PMCID: PMC6667225.
• Li K, Habre R, Deng H, Urman R, Morrison J, Gilliland FD, Ambite JL, Stripelis D, Chiang YY, Lin Y, Bui AAT, King C, Hosseini A, Vliet EV, Sarrafzadeh M, Eckel SP. Applying Multivariate Segmentation Methods to Human Activity Recognition From Wearable Sensors’ Data. JMIR Mhealth Uhealth. 2019 Feb 7;7(2):e11201. doi: 10.2196/11201. PMID: 30730297; PMCID: PMC6386646.
• Taylor SL, Herman PM, Marshall NJ, Zeng Q, Yuan A, Chu K, Shao Y, Morioka C, Lorenz KA. Use of Complementary and Integrated Health: A Retrospective Analysis of U.S. Veterans with Chronic Musculoskeletal Pain Nationally. J Altern Complement Med. 2019 Jan;25(1):32-39. doi: 10.1089/acm.2018.0276. Epub 2018 Oct 12. PMID: 30312109.

• Shao Y, Taylor S, Marshall N, Morioka C, Zeng-Treitler Q. Clinical Text Classification with Word Embedding Features vs Bag-of-Words. The 5th Workshop on Big Data Analytic Technology for Bioinformatics and Health Informatics IEEE BigData Dec. 2018 conference, 2874-2878.
• Petousis P, Naeim A, Mosleh A, Hsu W. Evaluating the Impact of Uncertainty on Risk Prediction: Towards More Robust Prediction Models. AMIA Annu Symp Proc. 2018 Dec 5;2018:1461-1470. PMID: 30815191; PMCID: PMC6371325.
• Li W, Wang Y, Cai Y, Arnold CW, Zhao E, Yuan Y. Semi-supervised rare disease detection using generative adversarial network. arXiv preprint arXiv:1812.00547. 2018 Dec 3.
• Meng Y, Speier W, Dzubur E, Spiegel B, Arnold CW. Predicting Patient Health Status using Activity Tracker Data. Proceedings of the 2018 American Medical Informatics Association Annual Symposium. San Francisco; 2018.
• Bui AAT. Optimizing imaging-based clinical decision making processes. World Brain Mapping Conference, Society for Brain Mapping Technologies (SBMT). Los Angeles,California, USA; 2018.
• Shiwen S, Smedley NF, Rios Piedra EAR, Hsu W. Hybrid Hierarchical Model for Lung Cancer Prediction. International Symposium on Biomedical Imaging (ISBI). 2018.
• Li W, Li J, Sarma KV, Ho KC, Shen S, Knudsen BS, Gertych A, Arnold CW. Path R-CNN for Prostate Cancer Diagnosis and Gleason Grading of Histological Images. IEEE Trans Med Imaging. 2019 Apr;38(4):945-954. DOI: 10.1109/TMI.2018.2875868. Epub 2018 Oct 12. PMID: 30334752; PMCID: PMC6497079.
• Smedley NF, Ellingson BM, Cloughesy TF, Hsu W. Longitudinal Patterns in Clinical and Imaging Measurements Predict Residual Survival in Glioblastoma Patients. Sci Rep. 2018 Sep 26;8(1):14429. DOI: 10.1038/s41598-018-32397-z. PMID: 30258190; PMCID: PMC6158293.
• Li J, Speier W, Ho KC, Sarma KV, Gertych A, Knudsen BS, Arnold CW. An EM-based semi-supervised deep learning approach for semantic segmentation of histopathological images from radical prostatectomies. Comput Med Imaging Graph. 2018 Nov;69:125-133. DOI: 10.1016/j.compmedimag.2018.08.003. Epub 2018 Sep 3. PMID: 30243216; PMCID: PMC6173982.
• Winter A, Féray C, Audureau E, Azoulay D, Antoine C, Daurès JP, Landais P. A Donor Quality Index for liver transplantation: development, internal and external validation. Sci Rep. 2018 Jun 29;8(1):9871. DOI: 10.1038/s41598-018-27960-7. Erratum in: Sci Rep. 2018 Oct 5;8(1):15109. PMID: 29959344; PMCID: PMC6026153.
• Speier W, Dzubur E, Zide M, Shufelt C, Joung S, Van Eyk JE, Bairey Merz CN, Lopez M, Spiegel B, Arnold CW. Evaluating utility and compliance in a patient-based eHealth study using continuous-time heart rate and activity trackers. J Am Med Inform Assoc. 2018 Oct 1;25(10):1386-1391. DOI: 10.1093/jamia/ocy067. PMID: 29850807; PMCID: PMC6188512.
• Matiasz NJ, Wood J, Doshi P, Speier W, Beckemeyer B, Wang W, Hsu W, Silva AJ. ResearchMaps.org for integrating and planning research. PLoS One. 2018 May 3;13(5):e0195271. DOI: 10.1371/journal.pone.0195271. PMID: 29723213; PMCID: PMC5933701.
• Winter A, Daurès JP, Landais P. Intention-to-treat survival benefit in liver transplantation: Comments on Lai et al. Hepatology. 2018 Apr;67(4):1638-1639. DOI: 10.1002/hep.29755. Epub 2018 Feb 27. PMID: 29272034.
• Ing N, Ma Z, Li J, Salemi H, Arnold CW, Knudsen BS, Gertych A. Semantic segmentation for prostate cancer grading by convolutional neural networks. Medical Imaging 2018: Digital Pathology. International Society for Optics and Photonics. 2018. p. 105811B.
• Li J, Sarma KV, Chung Ho K, Gertych A, Knudsen BS, Arnold CW. A Multi-scale U-Net for Semantic Segmentation of Histological Images from Radical Prostatectomies. AMIA Annu Symp Proc. 2018 Apr 16;2017:1140-1148. PMID: 29854182; PMCID: PMC5977596.
• Smedley NF, Hsu W. Using deep neural networks for radiogenomic analysis. Proc IEEE Int Symp Biomed Imaging. 2018 Apr;2018:1529-1533. DOI: 10.1109/ISBI.2018.8363864. Epub 2018 May 24. PMID: 30093961; PMCID: PMC6081189.
• Winter A, Aberle DR, Hsu W. External validation and Re-Calibration of the Brock Model to Predict Probability of Cancer in Pulmonary Nodules using NLST Data. RSNA. Chicago, USA; 2018.
• Garcia-Gathright JI, Matiasz NJ, Adame C, Sarma KV, Sauer L, Smedley NF, Spiegel ML, Strunck J, Garon EB, Taira RK, Aberle DR, Bui AAT. Evaluating Casama: Contextualized semantic maps for summarization of lung cancer studies. Comput Biol Med. 2018 Jan 1;92:55-63. DOI: 10.1016/j.compbiomed.2017.10.034. Epub 2017 Nov 3. PMID: 29149658; PMCID: PMC5762403.

• Speier W, Arnold CW, Chandravadia N, Roberts D, Pendekanti S, Pouratian N. Improving P300 Spelling Rate using Language Models and Predictive Spelling. Brain Comput Interfaces (Abingdon). 2018;5(1):13-22. DOI: 10.1080/2326263X.2017.1410418. Epub 2017 Dec 26. PMID: 30560145; PMCID: PMC6294452.
• Shen S, Bui AAT, Hsu W. Robust lung nodule classification using 2.5D convolutional neural network. Proc AMIA Fall Symp 2017. Washington, D.C.; 2017.
• Matiasz NJ, Wood J, Wang W, Hsu W, Silva AJ. Translating literature into causal graphs: Toward automated experiment selection. Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine (BIBM). Kansas City, MO; 2017. DOI: 10.1109/BIBM.2017.8217713.
• AR E, Cloughesy T, Ellingson B, El-Saden S, Bui AAT, Hsu W. Evaluating the applicability of tumor probability maps as a resource for improved brain tumor segmentation. Proc Ann Society Neuro-Oncology Scientific Meeting, 2017. San Francisco,California, USA; 2017.
• Hsu W, Petousis P, Yu W, Meng F, Bui AAT. A web-based platform for evaluating and disseminating predictive models. 2017 AMIA Joint Summits on Translational Science. San Francisco, California, USA; 2017.
• Rios Piedra EAR, Ellingson B, El-Saden S, Taira RK, Bui AAT, Hsu W. Measuring Tumor Boundary Variability to Improve Automated Segmentation of Brain Tumors Using Multimodal MRI. Poster presented at International Society for Magnetic Resonance in Medicine (ISMRM). 2017.
• Winter A, Daurès JP, Landais P. Response to why the donor risk index and Eurotransplant donor risk index may also be applicable in France; reply to Winter et al. and statistical perspective. Liver Int. 2017 Oct;37(10):1573. DOI: 10.1111/liv.13507. PMID: 28940954.
• Roberts D, Speier W, Chandravadia N, Pendekanti S, Pouratian N. Optimizing EEG Electrode Configuration in a P300 Speller Brain-Computer Interface: a step toward Clinical Implementation. UC BME Symposium. 2017.
• Chandravadia N, Speier W, Roberts D, Pendekanti S, Pouratian N. Evaluating the effect of stimulus paradigms on typing speed using the P300 speller in an online setting. UC BME Symposium. 2017.
• Ho K, Speier W, El-Saden S, Arnold C. Classifying Acute Ischemic Stroke Onset Time using Deep Imaging Features. AMIA Annu Symp Proc. 2017.
• Rios Piedra EAR, Ellingson B, Cloughesy T, Taira RK, El-Saden S, Bui AAT, Hsu W. Hybrid Hierarchical Model for Lung Cancer Prediction. International Symposium on Biomedical Imaging (ISBI). 2017.
• Hollada J, Zide M, Speier W, Roter E. Readability assessment of PCORI public abstracts in relation to accessibility. Epidemiology. 2017;28(4):e37–e38.
• Mostafavi L, Hollada J, Speier W, Ruehm S. Patients’ Perceptions of Risks and Benefits of Cardiac Imaging. Annual Congress of the European Congress of Radiology. 2017
• Speier W, Deshpande A, Cui L, Chandravadia N, Roberts D, Pouratian N. A comparison of stimulus types in online classification of the P300 speller using language models. PLoS One. 2017 Apr 13;12(4):e0175382. DOI: 10.1371/journal.pone.0175382. PMID: 28406932; PMCID: PMC5391014.
• Rios Piedra EAR, Orosz I, Zide M, El-Saden S, Taira RK, Bui AAT, Hsu W. A Usability Study to Evaluate the Impact of a Novel Automated Brain Tumor Assessment Application. Poster presented at American Medical Informatics Association. 2017.
• Levesque E, Winter A, Noorah Z, Daurès JP, Landais P, Feray C, Azoulay D. Impact of acute-on-chronic liver failure on 90-day mortality following a first liver transplantation. Liver Int. 2017 May;37(5):684-693. DOI: 10.1111/liv.13355. Epub 2017 Feb 27. PMID: 28052486.
• Winter A, Féray C, Audureau E, Écochard R, Jacquelinet C, Roudot-Thoraval F, Duvoux C, Daurès JP, Landais P. External validation of the Donor Risk Index and the Eurotransplant Donor Risk Index on the French liver transplantation registry. Liver Int. 2017 Aug;37(8):1229-1238. DOI: 10.1111/liv.13378. Epub 2017 Feb 23. PMID: 28140515..
• Matiasz NJ, Wood J, Wang W, Silva AJ, Hsu W. Computer-Aided Experiment Planning toward Causal Discovery in Neuroscience. Front Neuroinform. 2017 Feb 13;11:12. DOI: 10.3389/fninf.2017.00012. PMID: 28243197; PMCID: PMC5304468.
• Kuo TT, Rao P, Maehara C, Doan S, Chaparro JD, Day ME, Farcas C, Ohno-Machado  L, Hsu CN. Ensembles of NLP Tools for Data Element Extraction from Clinicsal Notes. AMIA Annu Symp Proc. 2017 Feb 10;2016:1880-1889. eCollection 2016. PubMed PMID: 28269947; PubMed Central PMCID: PMC5333200.
• Shen S, Han SX, Petousis P, Weiss RE, Meng F, Bui AAT, Hsu W. A Bayesian model for estimating multi-state disease progression. Comput Biol Med. 2017 Feb 1;81:111-120. DOI: 10.1016/j.compbiomed.2016.12.011. Epub 2016 Dec 22. PMID: 28038345; PMCID: PMC5508542.

• Morioka C, Meng F, Taira R, Sayre J, Zimmerman P, Ishimitsu D, Huang J, Shen L, El-Saden S. Automatic Classification of Ultrasound Screening Examinations of the Abdominal Aorta. J Digit Imaging. 2016 Dec;29(6):742-748. doi: 10.1007/s10278-016-9889-6. PMID: 27400914; PMCID: PMC5114229.
• Donnadieu-Rigole H, Olive L, Nalpas B, Winter A, Ursic-Bedoya J, Faure S, Pageaux GP, Perney P. Follow-Up of Alcohol Consumption After Liver Transplantation: Interest of an Addiction Team? Alcohol Clin Exp Res. 2017 Jan;41(1):165-170. DOI: 10.1111/acer.13276. Epub 2016 Dec 9. PMID: 27936489.
• Speier W, Chandravadia N, Roberts D, Pendekanti S, Pouratian N. Online BCI Typing using Language Model Classifiers by ALS Patients in their Homes. Brain Comput Interfaces (Abingdon). 2017;4(1-2):114-121. DOI: 10.1080/2326263X.2016.1252143. Epub 2016 Nov 15. PMID: 29051907; PMCID: PMC5644496.
• Ho KC, Scalzo F, Sarma KV, El-Saden S, Bui AAT, Arnold CW. A Novel Bi-Input Convolutional Neural Network for Deconvolution-Free Estimation of Stroke MR Perfusion Parameters. 2016 Annual Meeting of the Radiological Society of North America. Chicago, IL; 2016.
• Jann K, Smith RX, Rios Piedra EAR, Dapretto M, Wang DJ. Noise Reduction in Arterial Spin Labeling Based Functional Connectivity Using Nuisance Variables. Front Neurosci. 2016 Aug 23;10:371. DOI: 10.3389/fnins.2016.00371. PMID: 27601973; PMCID: PMC4993769.
• Matiasz NJ, Chen W-T, Silva AJ, Hsu W. MedicineMaps: A tool for mapping and linking evidence from experimental and clinical trial literature. AMIA Annu Symp Proc. Chicago, IL; 2016.
• Sarma KV, Zhong X, Ho KC, Margolis DJA, Raman S, Scalzo F, Sung KH, Tan N, Arnold CW. An Investigational Patch-based Convolutional Neural Network Model for the Detection of Clinically Significant Prostate Cancer using Multiparametric MRI. 2016 Annual Meeting of the Radiological Society of North America. Chicago, IL; 2016.
• Tong M, Hsu W, Taira RK. A visualization for clinical trial reports: A usability study. AMIA Annu Symp Proc. Chicago, IL; 2016.
• Hsu W, Maehara CK, Andrada LP, Beckett KR, McWilliams JP, Moriarty JM, Enzmann DR. Using Time-Driven Activity Based Costing (TDABC) to characterize cost variability in interventional radiology procedures. 2016 Annual Meeting of the Radiological Society of North America. Chicago, IL; 2016.
• Rios Piedra EAR, Taira RK, El-Saden S, Ellingson BM, Bui AAT, Hsu W. GlioView: An application that visualizes variability in brain tumor segmentation to inform the clinical assessment of change. 2016 Annual Meeting of the Radiological Society of North America. Chicago, IL; 2016.
• Petousis P, Han SX, Aberle DR, Bui AAT. Prediction of lung cancer incidence on the low-dose computed tomography arm of the National Lung Screening Trial: A dynamic Bayesian network. Artif Intell Med. 2016 Sep;72:42-55. DOI: 10.1016/j.artmed.2016.07.001. Epub 2016 Jul 27. PMID: 27664507; PMCID: PMC5082434..
• Wibulpolprasert P, Raman SS, Khoshnoodi P, Yu W, Hsu W, Tan N, Huang J, Lu D, Margolis DJ, Reiter R. MP53-05 Performance of 3T multiparameteric MRI in diagnosis of prostate cancer in comparison with whole mount histopathology: A 5 year experience. Urology [Internet]. 2016;195(4):e698. DOI: http://dx.doi.org/10.1016/j.juro.2016.02.502.
• Ho KC, Scalzo F, Sarma KV, El-Saden S, Arnold CW. A Temporal Deep Learning Approach for MR Perfusion Parameter Estimation in Stroke. 23rd International Conference on Pattern Recognition. Cancun; 2016.
• Matiasz NJ, Wood J, Hsu W, Silva AJ. ResearchMaps.org: A free web app for integrating and planning experiments. Proceedings of the 15th Annual Molecular and Cellular Cognition Society (MCCS) Symposium. San Diego; 2016.
• Hsu W, El-Saden S, Taira RK. Medical Imaging Informatics. In: Shen B, Tang H, Jiang X, editors. Translational Biomedical Informatics: A Precision Medicine Perspective. Singapore: Springer; 2016.
• Alaa A, Moon K, Hsu W, Schaar M van der. ConfidentCare: A clinical decision support system for personalized breast cancer screening. IEEE Transactions on Multimedia [Internet]. 2016;18(10):1942–55. DOI: http://dx.doi.org/10.1016/j.juro.2016.02.502.
• Sward KA, Bui AAT, Ambite JL, Dellarco M. Pediatric Research using Integrated Sensor Monitoring Systems (PRISMS): Applying sensor technology and informatics to better understand asthma. Proceedings of the 2016 American Medical Informatics Association Annual Symposium. Washington, D.C.; 2016.
• Habre R, King CE, Eckel SP, Sarrafzadeh M, Gilliland F, Bui AAT. The Los Angeles Pediatric Research using Integrated Sensor Monitoring Systems (LA PRISMS) Center:Biomedical REAl-Time Health Evaluation (BREATHE). Intl Soc Exposure Science (ISES) Annual Meeting, 2016. Utrecht, The Netherlands; 2016.
• Speier W, Arnold CW, Pouratian N. Integrating language models into classifiers for BCI communication: a review. J Neural Eng. 2016 Jun;13(3):031002. DOI: 10.1088/1741-2560/13/3/031002. Epub 2016 May 6. PMID: 27153565; PMCID: PMC5495144.
• Habre R, Ambite JL, Bui AAT, Cummins MR, Dellarco M, Eckel SP, Gouripeddi R, Gillil F, Sward KA. Pediatric Research using Inte-grated Sensor Monitoring Systems (PRISMS): Data Modeling Working Group. Intl Soc Exposure Science (ISES) Annual Meeting, 2016. Utrecht, The Netherlands; 2016.
• Rios Piedra EAR, Taira RK, El-Saden S, Ellingson BM, Bui AAT, Hsu W. Assessing Variability in Brain Tumor Segmentation to Improve Volumetric Accuracy and Characterization of Change. IEEE EMBS Int Conf Biomed Health Inform. 2016 Feb;2016:380-383. DOI: 10.1109/BHI.2016.7455914. Epub 2016 Apr 21. PMID: 28670648; PMCID: PMC5489257.
• Rios Piedra EAR, Taira RK, El-Saden S, Ellingson BM, Bui AAT, Hsu W. Assessing Variability in Brain Tumor Segmentation to Improve Volumetric Accuracy and Characterization of Change. IEEE EMBS Int Conf Biomed Health Inform. 2016 Feb;2016:380-383. DOI: 10.1109/BHI.2016.7455914. Epub 2016 Apr 21. PMID: 28670648; PMCID: PMC5489257.
• Speier W, Ong MK, Arnold CW. Using phrases and document metadata to improve topic modeling of clinical reports. J Biomed Inform. 2016 Jun;61:260-6. DOI: 10.1016/j.jbi.2016.04.005. Epub 2016 Apr 21. PMID: 27109931; PMCID: PMC4902330.
• Rios Piedra EAR, Taira RK, El-Saden S, Ellingson BM, Bui AAT, Hsu W. Assessing Variability in Brain Tumor Segmentation to Improve Volumetric Accuracy and Characterization of Change. IEEE EMBS Int Conf Biomed Health Inform. 2016 Feb;2016:380-383. DOI: 10.1109/BHI.2016.7455914. Epub 2016 Apr 21. PMID: 28670648; PMCID: PMC5489257.
• Garcia-Gathright JI, Matiasz NJ, Garon EB, Aberle DR, Taira RK, Bui AAT. Toward patient-tailored summarization of lung cancer literature. IEEE EMBS Int Conf Biomed Health Inform. 2016 Feb;2016:449-452. DOI: 10.1109/BHI.2016.7455931. Epub 2016 Apr 21. PMID: 28721401; PMCID: PMC5511748.
• Zaghi S, Alonso J, Orestes M, Kadin N, Hsu W, Berke G. Idiopathic Subglottic Stenosis: A Comparison of Tracheal Size. Ann Otol Rhinol Laryngol. 2016 Aug;125(8):622-6. DOI: 10.1177/0003489416642783. Epub 2016 Apr 11. PMID: 27067154.
• Ho KC, El-Saden S, Scalzo F, Bui AAT, Arnold CW. Abstract WP41: Predicting Acute Ischemic Stroke Tissue Fate Using Deep Learning on Source Perfusion MRI. Stroke. 2016;47.
• Shen S, Zhong X, Hsu W, Bui AAT, Wu H, Kuo M, Raman S, Margolis DJA, Sung KH. Quantitative MRI-Driven Deep Learning for Detection of Clinical Significant Prostate Cancer. 24th Intl Soc Magnetic Resonance in Medicine (ISMRM) Annual Meeting. Singapore; 2016.
• Sarma KV, Zhong X, Ho KC, Margolis DJA, Raman S, Scalzo F, Sung KH, Tan N, Arnold CW. Development of a Deep Learning Model for the Detection of Prostate Cancer using MRI. Gordon Research Conference in Advanced Health Informatics. Hong Kong; 2016.
• Nguyen T-L, Winter A, Spence J, Leguelinel-Blache G, Landais P, Le Manach Y. Causal Inference in Anesthesia and Perioperative Observational Studies. Current Anesthesiology Reports. Springer; 2016;6(3):293–298.
• Speier W, Chandravadia N, Pouratian N. Online BCI Typing using Language Models by ALS Patients in their Homes. International Brain-Computer Interface (BCI) Meeting. 2016.
• Panigrahi B, Hollada J, Speier W, Harvey S. Innovations in decreasing recall rates for screening mammography. SBI/ACR Breat Imaging Symposium. 2016.
• Rios Piedra EAR, Taira RK, El-Saden S, Ellingson B, Bui AAT, Hsu W. GlioView: An Application to Visualize Variability in Brain Tumor Segmentation to Inform the Clinical Assessment of Change. Applied science presentation at Radiological Society of North America (RSNA). 2016.
• Rios Piedra EAR, Ho KC, Taira RK, El-Saden S, Ellingson B, Bui AAT, Hsu W. Glioblastoma Multiforme Segmentation by Variability Characterization of Tumor Boundaries. Medical Image Computing and Computer Assisted Intervention Society (MICCAI), MICCAI-BRATS Conference Workshop. 2016.
• Matiasz NJ, Silva AJ, Hsu W. Synthesizing clinical trials for evidence-based medicine: A representation of empirical and hypothetical causal relations. Proceedings of the 6th Annual Joint Summits on Translational Science: AMIA Summit on Clinical Research Informatics. San Francisco; 2015.
• Winter A, Féray C, Jean-Pierre, Landais P. Survival benefit in liver transplantation by categories of severity scores using the Model For End-Stage Liver Disease (MELD) and the Donor Risk Index (DRI). ISCB. Birmingham, England; 2016.

• Hsu W, Han SX, Arnold CW, Bui AAT, Enzmann DR. A data-driven approach for quality assessment of radiologic interpretations. J Am Med Inform Assoc. 2016 Apr;23(e1):e152-6. DOI: 10.1093/jamia/ocv161. Epub 2015 Nov 25. PMID: 26606938; PMCID: PMC4954616.
• Laviana AA, Ilg AM, Veruttipong D, Tan HJ, Burke MA, Niedzwiecki DR, Kupelian PA, King CR, Steinberg ML, Kundavaram CR, Kamrava M, Kaplan AL, Moriarity AK, Hsu W, Margolis DJA, Hu JC, Saigal CS. Utilizing time-driven activity-based costing to understand the short- and long-term costs of treating localized, low-risk prostate cancer. Cancer. 2016 Feb 1;122(3):447-55. DOI: 10.1002/cncr.29743. Epub 2015 Nov 2. PMID: 26524087.
• Arnold CW, Oh A, Chen S, Speier W. Evaluating topic model interpretability from a primary care physician perspective. Comput Methods Programs Biomed. 2016 Feb;124:67-75. DOI: 10.1016/j.cmpb.2015.10.014. Epub 2015 Oct 30. PMID: 26614020; PMCID: PMC4724339.
• Arnold CW, Wallace WD, Chen S, Oh A, Abtin F, Genshaft S, Binder S, Aberle DR, Enzmann DR. RadPath: A Web-based System for Integrating and Correlating Radiology and Pathology Findings During Cancer Diagnosis. Acad Radiol. 2016 Jan;23(1):90-100. DOI: 10.1016/j.acra.2015.09.009. Epub 2015 Oct 27. PMID: 26521686.
• Pan P, Huang J, Morioka C, Hathout G, El-Saden SM. Cost analysis of vestibular schwannoma screening with contrast-enhanced magnetic resonance imaging in patients with asymmetrical hearing loss. J Laryngol Otol. 2016 Jan;130(1):21-4. doi: 10.1017/S0022215115002431. Epub 2015 Sep 14. PMID: 26365591.
• Nikkola E, Laiwalla A, Ko A, Alvarez M, Connolly M, Ooi YC, Hsu W, Bui AAT, Pajukanta P, Gonzalez NR. Remote Ischemic Conditioning Alters Methylation and Expression of Cell Cycle Genes in Aneurysmal Subarachnoid Hemorrhage. Stroke. 2015 Sep;46(9):2445-51. DOI: 10.1161/STROKEAHA.115.009618. Epub 2015 Aug 6. PMID: 26251247; PMCID: PMC4550559.
• McNamara M, Arnold CW, Sarma KV, Aberle DR, Garon E, Bui AAT. Patient Portal Preferences: Perspectives on Imaging Information. J Assoc Inf Sci Technol. 2015 Aug 1;66(8):1606-1615. DOI: 10.1002/asi.23269. PMID: 26191535; PMCID: PMC4504683.
• Hollada J, Speier W, Oshiro T, Marzan-McGill R, Ruehm SG, Bassett LW, Wells C. Patients’ Perceptions of Radiation Exposure Associated With Mammography. AJR Am J Roentgenol. 2015 Jul;205(1):215-21. DOI: 10.2214/AJR.14.13650. PMID: 26102402.
• Winter A, Levesque E, Noorah Z, Daurès J-P, Landais P, Féray C, Azoulay D. A prognostic score of futility for early mortality in liver transplantation in cirrhotic patients. ISCB. Utrecht, the Netherlands; 2015.
• Hollada J, Mostafavi L, Speier W, Javidi S, Ruehm S. Cardiac Imaging Exams: Patient Awareness of Associated Utilization of Radiation. RSNA Annual Meeting. 2015.
• Speier W, Arnold CW, Deshpande A, Knall J, Pouratian N. Incorporating advanced language models into the P300 speller using particle filtering. J Neural Eng. 2015 Aug;12(4):046018. DOI: 10.1088/1741-2560/12/4/046018. Epub 2015 Jun 10. PMID: 26061188; PMCID: PMC4509796.
• Abtin F, Suh RD, Nasehi L, Han SX, Hsu W, Quirk M, Genshaft SJ, Gutierrez AJ, Cameron RB. Percutaneous cryoablation for the treatment of recurrent thymoma: preliminary safety and efficacy. J Vasc Interv Radiol. 2015 May;26(5):709-14. DOI: 10.1016/j.jvir.2014.12.024. PMID: 25921453.
• Smedley NF, Chau N, Petruse A, Bui AAT, Naeim A, Hsu W. A platform for generating and validating breast risk models from clinical data: Towards patient-centered risk stratified screening. AMIA Annu Symp Proc. San Francisco, CA, USA; 2015.
• Meng F, Morioka CA. Automating the generation of lexical patterns for processing free text in clinical documents. J Am Med Inform Assoc. 2015 Sep;22(5):980-6. DOI: 10.1093/jamia/ocv012. Epub 2015 May 14. PMID: 25977405; PMCID: PMC4986670.
• Mostafavi L, Marfori W, Arellano C, Tognolini A, Speier W, Adibi A, Ruehm SG. Prevalence of coronary artery disease evaluated by coronary CT angiography in women with mammographically detected breast arterial calcifications. PLoS One. 2015 Apr 9;10(4):e0122289. DOI: 10.1371/journal.pone.0122289. PMID: 25856075; PMCID: PMC4391859.
• Hsu W, Gonzalez NR, Chien A, Pablo Villablanca J, Pajukanta P, Viñuela F, Bui AAT. An integrated, ontology-driven approach to constructing observational databases for research. J Biomed Inform. 2015 Jun;55:132-42. DOI: 10.1016/j.jbi.2015.03.008. Epub 2015 Mar 26. PMID: 25817919; PMCID: PMC4464942.
• Song L, Hsu W, Xu J, van der Schaar M. Using Contextual Learning to Improve Diagnostic Accuracy: Application in Breast Cancer Screening. IEEE J Biomed Health Inform. 2016 May;20(3):902-914. DOI: 10.1109/JBHI.2015.2414934. Epub 2015 Mar 20. PMID: 25807575.
• Shen S, Han SX, Petousis P, Meng F, Bui AAT, Hsu W. Continuous Markov Model Approach Using Individual Patient Data to Estimate Mean Sojourn Time of Lung Cancer. AMIA Annu Symp Proc. San Francisco, CA, USA; 2015.
• Duggan N, Bae E, Shen S, Hsu W, Bui AAT, Jones E, Glavin M, Vese L. A technique for lung nodule candidate detection in CT using global minimization methods. Energy Minimization Methods in Computer Vision and Pattern Recognition. Springer International Publishing; 2015.
• Oh AS, Arnold CW, Vangala S, Wallace WD, Genshaft SJ, Sarma KV, Aberle DR. Imaging-histologic discordance at percutaneous biopsy of the lung. Acad Radiol. 2015 Apr;22(4):481-7. DOI: 10.1016/j.acra.2014.11.009. Epub 2015 Jan 15. PMID: 25601302.
• Garcia-Gathright JI, Oh A, Abarca PA, Han M, Sago W, Spiegel ML, Wolf B, Garon EB, Bui AAT, Aberle DR. Representing and extracting lung cancer study metadata: study objective and study design. Comput Biol Med. 2015 Mar;58:63-72. DOI: 10.1016/j.compbiomed.2015.01.004. Epub 2015 Jan 13. PMID: 25618216; PMCID: PMC4331232.

• Matiasz NJ, Hsu W, Silva AJ. ResearchMaps.org, a free web application to track causal information in biology. Proceedings of the 13th Annual Molecular and Cellular Cognition Society (MCCS) Symposium. Washington, D.C.; 2014.
• Shen S, Bui AAT, Cong J, Hsu W. An automated lung segmentation approach using bidirectional chain codes to improve nodule detection accuracy. Comput Biol Med. 2015 Feb;57:139-49. DOI: 10.1016/j.compbiomed.2014.12.008. Epub 2014 Dec 18. PMID: 25557199.
• McNamara M, Sarma KV, Aberle DR, Bui AAT, Arnold CW. Data model for personalized patient health guidelines: an exploratory study. AMIA Annu Symp Proc. 2014 Nov 14;2014:1835-44. PMID: 25954456; PMCID: PMC4419921..
• Singleton KW, Speier W, Bui AAT, Hsu W. Motivating the additional use of external validity: examining transportability in a model of glioblastoma multiforme. AMIA Annu Symp Proc. 2014 Nov 14;2014:1930-9. PMID: 25954466; PMCID: PMC4419978.
• Ho KC, Speier W, El-Saden S, Liebeskind DS, Saver JL, Bui AAT, Arnold CW. Predicting discharge mortality after acute ischemic stroke using balanced data. AMIA Annu Symp Proc. 2014 Nov 14;2014:1787-96. PMID: 25954451; PMCID: PMC4419881.
• Speier W, Deshpande A, Pouratian N. A method for optimizing EEG electrode number and configuration for signal acquisition in P300 speller systems. Clin Neurophysiol. 2015 Jun;126(6):1171-1177. DOI: 10.1016/j.clinph.2014.09.021. Epub 2014 Sep 28. PMID: 25316166; PMCID: PMC4377128.
• Singleton KW, Bui AAT, Hsu W. Transfer and transport: incorporating causal methods for improving predictive models. J Am Med Inform Assoc. 2014 Oct;21(e2):e374-5. DOI: 10.1136/amiajnl-2014-002968. Epub 2014 Jul 9. PMID: 25008007; PMCID: PMC4173188.
• Garcia-Gathright JI, Meng F, Hsu W. UCLA at TREC 2014 clinical decision support track: Exploring language models, query expansion, and boosting. The Twenty-Third Text REtrieval Conference (TREC 2014). 2014.
• Haas BE, Gonzalez NR, Nikkola E, Connolly M, Hsu W, Bui AAT, Vinuela F, Pajukanta P. Feasibility and preliminary results of whole blood RNA-sequencing analysis in patients with intracranial aneurysms. Stroke. 2014;45.
• Ho KC, Speier W, El-Saden S, Liebeskind DS, Saver JL, Bui AAT, Arnold CW. Predicting discharge mortality in acute ischemic stroke patients using support vector machines and affinity propagation. MUCMD. 2014.
• Tong M, McNamara M. A patient portal for clinical trials: Towards increasing patient enrollment. AMIA Annu Symp Proc. 2014.
• Han SX, Hsu W, Arnold CW, Margolis DJA, Bui AAT, Enzmann DR. RadQA: Automated quality control of radiological interpretations in prostate cancer. RSNA Annual Meeting. Chicago, IL; 2014.
• Malekmohammaki M, Speier W, Pouratian N. Pallidal-Cortical Beta Coherence is Activity-modulated by not Causally related in PD. ASSFN Biennial Meeting. 2014.
• Hollada J, Marfori W, Tognolini A, Speier W, Ristow L, Ruehm SG. Successful patient recruitment in CT imaging clinical trials: what factors influence patient participation? Acad Radiol. 2014 Jan;21(1):52-7. DOI: 10.1016/j.acra.2013.09.016. PMID: 24331264.
• Speier W, Arnold C, Lu J, Deshpande A, Pouratian N. Integrating language information with a hidden Markov model to improve communication rate in the P300 speller. IEEE Trans Neural Syst Rehabil Eng. 2014 May;22(3):678-84. DOI: 10.1109/TNSRE.2014.2300091. Epub 2014 Jan 21. PMID: 24760927; PMCID: PMC4205234.
• Speier W, Knall J, Pouratian N. Unsupervised training of brain-computer interface systems using expectation maximization. Neural Engineering (NER) 2013 6th International IEEE/EMBS Conference. 2013. DOI: 10.1109/NER.2013.6696032.

• Hsu W, Markey MK, Wang MD. Biomedical imaging informatics in the era of precision medicine: progress, challenges, and opportunities. J Am Med Inform Assoc. 2013 Nov-Dec;20(6):1010-3. DOI: 10.1136/amiajnl-2013-002315. PMID: 24114330; PMCID: PMC3822124.
• Hsu W, Bui AAT. Leveraging domain knowledge to facilitate visual exploration of large population datasets. AMIA Annu Symp Proc. 2013 Nov 16;2013:615-23. PMID: 24551363; PMCID: PMC3900204.
• Speier W, Arnold CW, Pouratian N. Evaluating true BCI communication rate through mutual information and language models. PLoS One. 2013 Oct 22;8(10):e78432. DOI: 10.1371/journal.pone.0078432. PMID: 24167623; PMCID: PMC3805537
• Chen X, Arnold CW. Integrating UIMA annotators in a web-based text processing framework. Stud Health Technol Inform. 2013;192:1191. PMID: 23920965.
• Tong M, Hsu W, Taira RK. A formal representation for numerical data presented in published clinical trial reports. Stud Health Technol Inform. 2013;192:856-60. PMID: 23920679; PMCID: PMC5025869.
• Love A, Arnold CW, El-Saden S, Liebeskind DS, Andrada LP, Saver J, Bui AAT. Unifying acute stroke treatment guidelines for a Bayesian belief network. Stud Health Technol Inform. 2013;192:1012. PMID: 23920786.
• Taira RK, Arnold CW. Hierarchical semantic structures for medical NLP. Stud Health Technol Inform. 2013;192:1194. PMID: 23920968.
• Arnold CW, Nguyen T, Janzen C. BabySTEPS: a sugar tracking electronic portal system for gestational diabetes. Stud Health Technol Inform. 2013;192:1123. PMID: 23920897
• McNamara M, Arnold CW, Sarma KV, Aberle DR, Bui AAT. Patient portal for NSCLC with supporting health information. RSNA Annual Meeting. Chicago, IL; 2013.
• Abtin F, Sandberg JK, Suh RD, Hsu W, Sayre JW, Cameron RB. Percutaneous cryoablation in management of recurrent mesothelioma after surgical pleurectomy and decortication: Efficacy and predictors of local recurrence. RSNA Annual Meeting. 2013.
• Hsu W, Tong M, Taira RK, Bui AAT. Visualizing evidence in biomedical literature: Integration and application of clinical, imaging, and genomic findings reported in research studies. RSNA Annual Meeting. 2013.
• Garcia-Gathright JI, Arnold CW, Bui AAT. Automatic extraction of patient characteristics from clinical reports. RSNA Annual Meeting. Chicago, IL; 2013.
• Han SX, Nasehi L, Abtin F, Hsu W. An observational database on thymoma patients for studying cryoablation outcomes. 4th International Thymic Malignancy Interest Group Annual Meeting. 2013.
• Arnold CW, Wallace DW, Abtin F, Ellingson BM, Bui AAT, Binder S, Aberle DR, Enzmann DR. RadPath: An electronic platform for integrating radiology and pathology findings during cancer diagnosis. RSNA Annual Meeting. 2013.
• Arnold CW, Love A, El-Saden S, Liebeskind DS, Andrada LP, Saver J, Bui AA.  A Bayesian Network for Reasoning on Acute Ischemic Stroke Intervention.  Stroke(44), 2013.
• Bui AAT, Hsu W, Arnold CW, El-Saden S, Aberle DR, Taira RK. Imaging-based observational databases for clinical problem solving: the role of informatics. J Am Med Inform Assoc. 2013 Nov-Dec;20(6):1053-8. DOI: 10.1136/amiajnl-2012-001340. Epub 2013 Jun 17. PMID: 23775172; PMCID: PMC3822107
• Arnold CW, McNamara M, El-Saden S, Chen S, Taira RK, Bui AAT. Imaging informatics for consumer health: towards a radiology patient portal. J Am Med Inform Assoc. 2013 Nov-Dec;20(6):1028-36. DOI: 10.1136/amiajnl-2012-001457. Epub 2013 Jun 5. PMID: 23739614; PMCID: PMC3822110..
• Speier W, Fried I, Pouratian N. Improved P300 speller performance using electrocorticography, spectral features, and natural language processing. Clin Neurophysiol. 2013 Jul;124(7):1321-8. DOI: 10.1016/j.clinph.2013.02.002. Epub 2013 Mar 5. PMID: 23465430; PMCID: PMC3679217.

• Woodbridge J, Mortazavi B, Sarrafzadeh M, Bui AAT. A Monte Carlo Approach to Biomedical Time Series Search. Proceedings (IEEE Int Conf Bioinformatics Biomed). 2012 Oct;2012:71-76. DOI: 10.1109/BIBM.2012.6392646. Epub 2012 Dec 24. PMID: 27617164; PMCID: PMC5016193.
• Wu JA, Hsu W, Bui AAT. An Approach for Incorporating Context in Building Probabilistic Predictive Models. Proc IEEE Int Conf Healthc Inform Imaging Syst Biol. 2012 Sep;2012:96-105. DOI: 10.1109/HISB.2012.30. Epub 2012 Dec 3. PMID: 27617299; PMCID: PMC5017790.
• Woodbridge J, Mortazavi B, Bui AAT, Sarrafzadeh M. High performance biomedical time series indexes using salient segmentation. Conf Proc IEEE Eng Med Biol Soc. 2012;2012:5086-9. DOI: 10.1109/EMBC.2012.6347137. PMID: 23367072; PMCID: PMC5014401.
• Suh MK, Moin T, Woodbridge J, Lan M, Ghasemzadeh H, Bui A, Ahmadi S, Sarrafzadeh M. Dynamic self-adaptive remote health monitoring system for diabetics. Conf Proc IEEE Eng Med Biol Soc. 2012;2012:2223-6. DOI: 10.1109/EMBC.2012.6346404. PMID: 23366365; PMCID: PMC5017249.
• Singleton KW, Hsu W, Bui AAT. Comparing predictive models of glioblastoma multiforme built using multi-institutional and local data sources. AMIA Annu Symp Proc. 2012;2012:1385-92. Epub 2012 Nov 3. PMID: 23304418; PMCID: PMC3540487
• Hsu W, Speier W, Taira RK. Automated extraction of reported statistical analyses: towards a logical representation of clinical trial literature. AMIA Annu Symp Proc. 2012;2012:350-9. Epub 2012 Nov 3. PMID: 23304305; PMCID: PMC3540551.
• Tong M, Hsu W, Taira RK. A representation for standardizing numerical data from clinical trial reports. RSNA Annual Meeting. Chicago, IL; 2012.
• Speier W, Ochs MF. Updating annotations with the distributed annotation system and the automated sequence annotation pipeline. Bioinformatics. 2012 Nov 1;28(21):2858-9. DOI: 10.1093/bioinformatics/bts530. Epub 2012 Sep 3. PMID: 22945787; PMCID: PMC3476339..
• Lu J, Speier W, Hu X, Pouratian N. The effects of stimulus timing features on P300 speller performance. Clin Neurophysiol. 2013 Feb;124(2):306-14. DOI: 10.1016/j.clinph.2012.08.002. Epub 2012 Aug 29. PMID: 22939456; PMCID: PMC3595069.
• Burns B, Furuyama JK, Wilson N, DeBruhl N, Thomas AM. Maximum entropy based reconstruction of echo-planar correlated spectroscopic imaging of human breast in vivo. Intl Soc Magnetic Resonance in Medicine (ISMRM). Melbourne, Australia: Intl Soc Magnetic Resonance in Medicine (ISMRM); 2012.
• Tong M, Taira RK. Improving the accuracy of therapy descriptions in clinical trials using a bottom-up approach. AMIA Annu Symp Proc. 2012. p. 1393–402.
• Speier W, Fried I, Pouratian N. Improving P300 speller classification using electrocorticography. AANS Annual Scientific Meeting. 2012.
• McNamara M, Arnold CW, Chen S, El-Saden S, Taira RK, Bui AAT. Patient portal for neuro-radiology with consumer oriented terminology. National Library of Medicine Informatics Fellowship Conference. 2012.
• Arnold CW, Speier W. A topic model of clinical reports. Proc ACM SIGIR Conf Research and Development in Information Retrieval. 2012. p. 1031–1032.
• Wu JA, Hsu W, Taira RK, Bui AAT. A population-based temporal visualization for predicting survival for non-small cell lung cancer. RSNA Annual Meeting. Chicago, IL; 2012.
• Speier W, Arnold CW, Lu J, Taira RK, Pouratian N. Using natural language processing methods to improve EEG classification in brain-computer interfaces. NLM Informatics Training Conference. 2012.
• Wu JA, Hsu W, Bui AAT. Extracting relevant information from clinical records: Towards modeling the evolution of intracranial aneurysms. AMIA Annu Symp Proc. 2012.
• Au LK, Bui AAT, Batalin MA, Kaiser WJ. Energy-efficient context classification with dynamic sensor control. IEEE Trans Biomed Circuits Syst. 2012 Apr;6(2):167-78. DOI: 10.1109/TBCAS.2011.2166073. PMID: 23852981; PMCID: PMC5019960..
• Hsu W, Taira RK, El-Saden S, Kangarloo H, Bui AAT. Context-based electronic health record: toward patient specific healthcare. IEEE Trans Inf Technol Biomed. 2012 Mar;16(2):228-34. DOI: 10.1109/TITB.2012.2186149. PMID: 22395637; PMCID: PMC4414061.
• Bui AAT, Cheng KT, Cong J, Vese L, Wang Y-C, Yuan B, Zou Y. Platform characterization for domain-specific computing. Design Automation Conference (ASP-DAC), 2012 17th Asia and South Pacific. Sydney, NSW: IEEE; 2012. DOI: 10.1109/ASPDAC.2012.6165071

Arnold CW, Bui AAT, El-Saden S, Aberle DR, Taira RK. Image and report indexing through automated topic discovery. RSNA Annual Meeting. 2011.

Arnold CW, Chen X, McNamara M, El-Saden S, Taira RK. A web-based patient radiology portal for result presentation and education. RSNA Annual Meeting. Chicago, IL; 2011.

Speier W, Arnold CW, Lu J, Taira RK, Pouratian N. Natural language processing with dynamic classification improves P300 speller accuracy and bit rate. J Neural Eng. 2012 Feb;9(1):016004. DOI: 10.1088/1741-2560/9/1/016004. Epub 2011 Dec 12. PMID: 22156110; PMCID: PMC3360927.

Au LK, Bui AAT, Batalin MA, Xu X, Kaiser WJ. CARER: efficient dynamic sensing for continuous activity monitoring. Conf Proc IEEE Eng Med Biol Soc. 2011;2011:2228-32. DOI: 10.1109/IEMBS.2011.6090422. PMID: 22254783; PMCID: PMC5019956.

Speier W, Iglesias JE, El-Kara L, Tu Z, Arnold CW. Robust skull stripping of clinical glioblastoma multiforme data. Med Image Comput Comput Assist Interv. 2011;14(Pt 3):659-66. DOI: 10.1007/978-3-642-23626-6_81. PMID: 22003756

Suh MK, Chen CA, Woodbridge J, Tu MK, Kim JI, Nahapetian A, Evangelista LS, Sarrafzadeh M. A remote patient monitoring system for congestive heart failure. J Med Syst. 2011 Oct;35(5):1165-79. doi: 10.1007/s10916-011-9733-y. Epub 2011 May 25. PMID: 21611788; PMCID: PMC3236812

Watt E, Sayre JW, Bui AA. Applying an Instance-specific Model to Longitudinal Clinical Data for Prediction. Proc IEEE Int Conf Healthc Inform Imaging Syst Biol. 2011 Jul;2011:81-88. DOI: 10.1109/HISB.2011.12. Epub 2011 Oct 27. PMID: 27570832; PMCID: PMC5001560.

Favorov A, Lvovs D, Speier W, Parmigiani G, Ochs MF. OnionTree XML: a format to exchange gene-related probabilities. J Biomol Struct Dyn. 2011 Oct;29(2):417-23. DOI: 10.1080/073911011010524994. PMID: 21875159; PMCID: PMC4856015.

Singleton KW, Lan M, Arnold CW, Vahidi M, Arangua L, Gelberg L, Bui AAT. Wireless data collection of self-administered surveys using tablet computers. AMIA Annu Symp Proc. 2011;2011:1261-9. Epub 2011 Oct 22. PMID: 22195187; PMCID: PMC3243243.

Meng F, Morioka CA, El-Saden S. Determining word sequence variation patterns in clinical documents using multiple sequence alignment. AMIA Annu Symp Proc. 2011;2011:934-43. Epub 2011 Oct 22. PMID: 22195152; PMCID: PMC3243120.

Iglesias JE, Liu CY, Thompson PM, Tu Z. Robust brain extraction across datasets and comparison with publicly available methods. IEEE Trans Med Imaging. 2011 Sep;30(9):1617-34. DOI: 10.1109/TMI.2011.2138152. PMID: 21880566.

Iglesias JE, Konukoglu E, Montillo A, Tu Z, Criminisi A. Combining generative and discriminative models for semantic segmentation of CT scans via active learning. Inf Process Med Imaging. 2011;22:25-36. DOI: 10.1007/978-3-642-22092-0_3. PMID: 21761643.

Jahanshad N, Aganj I, Lenglet C, Jin Y, Joshi A, Barysheva M, McMahon KL, Zubicaray GI de, Martin NG, Wright MJ. High angular resolution diffusion imaging (HARDI) tractography in 234 young adults reveals greater frontal lobe connectivity in women. IEEE 8th International Symposium on Biomedical Imaging. 2011.

Iglesias JE, Jiang J, Liu CY, Tu Z; Alzheimers Disease Neuroimaging Initiative. Classification of Alzheimer’s disease using a self-smoothing operator. Med Image Comput Comput Assist Interv. 2011;14(Pt 3):58-65. DOI: 10.1007/978-3-642-23626-6_8. PMID: 22003684.

Woodbridge J, Lan M, Sarrafzadeh M, Bui AAT. Salient Segmentation of Medical Time Series Signals. Proc IEEE Int Conf Healthc Inform Imaging Syst Biol. 2011 Jul;2011:1-8. DOI: 10.1109/HISB.2011.41. PMID: 27617296; PMCID: PMC5015443.

Suh MK, Woodbridge J, Lan M, Bui A, Evangelista LS, Sarrafzadeh M. Missing data imputation for remote CHF patient monitoring systems. Conf Proc IEEE Eng Med Biol Soc. 2011;2011:3184-7. DOI: 10.1109/IEMBS.2011.6090867. PMID: 22255016; PMCID: PMC3376905.

Hsu W, Taira RK, Viñuela F, Bui AAT. A Case-based Retrieval System using Natural Language Processing and Population-based Visualization. Proc IEEE Int Conf Healthc Inform Imaging Syst Biol. 2011 Jul;2011:221-228. DOI: 10.1109/HISB.2011.3. PMID: 27570833; PMCID: PMC5001495.

Suh M-kyung, Nahapetian A, Woodbridge J, Rofouei M, Sarrafzadeh M. Machine learning-based adaptive wireless interval training guidance system. Mobile Networks and Applications. 2012;17:163-177. DOI: 10.1007/s11036-011-0331-5.

Jahanshad N, McMahon KL, Zubicaray GI de, Medland SE, Montgomery GW, Martin NG, Wright MJ, Toga AW, Thompson P. Blood-iron independent genetic associations of brain structure to serum transferrin levels: a bivariate MRI and DTI analysis of 615 twins and siblings. Organization for Human Brain Mapping. 2011.

Jahanshad N, McMahon KL, Zubicaray GI de, Martin NG, Wright MJ, Toga AW, Thompson P. Heritability and reliability of the human connectome mapped using 4-Tesla high angular resolution diffusion imaging (HARDI) in 156 young adult twins. Organization for Human Brain Mapping. 2011;

Prasad G, Jahanshad N, Aganj I, Lenglet C, Sapiro G, Toga AW, Thompson PM. Atlas-based fiber clustering for multi-subject analysis of high angular resolution diffusion imaging tractography. Proc IEEE Int Symp Biomed Imaging. 2011 Apr;2011:276-280. DOI: 10.1109/ISBI.2011.5872405. PMID: 25404992; PMCID: PMC4232949.

Iglesias JE, Thompson P, Liu C-Y, Tu Z. Fast approximate stochastic tractography. Neuroinformatics. 2012;10:5-17. DOI: 10.1007/s12021-011-9113-2. PDF

Chen J, Yan M, Vese L, Villasenor J, Bui AAT, Cong J. EM+ TV for reconstruction of cone-beam CT with curved detectors using GPU. International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine. 2011.

Speier W, Arnold CW, Hsu W, Bui AAT. Content-based image retrieval using feature density estimates. AMIA Annu Symp Proc. Washington DC; 2011

Hsu W, Sayre JW, Bui AAT, Taira RK. Modeling medical imaging and molecular biology correlates from literature. AMIA Annu Symp Proc. Washington DC; 2011.

Yan M, Zou Y, Hsu W, Chien A, Vese L, Aberle DR, Bui AAT, Cong J. Accelerating medical image reconstruction and analysis using domain specific computing. RSNA Annual Meeting. Chicago, IL; 2011.

Moazeni M, Bui AAT, Sarrafzadeh M. Dynamic programming on data-parallel many-core architectures. Symp Application Accelerators in High Performance Computing (SAAHPC). Knoxville, Tennessee; 2011.

• Cong J, Sarkar V, Reinman G, Bui AAT. Customizable domain-specific computing. IEEE Design & Test of Computers. 2011;28:6–15. DOI: 10.1109/MDT.2010.141.
• Hsu W, Arnold CW, Taira RK. A Neuro-Oncology Workstation for Structuring, Modeling, and Visualizing Patient Records. IHI. 2010 Nov;2010:837-840. DOI: 10.1145/1882992.1883120. PMID: 27583308; PMCID: PMC5003527.
• Iglesias JE, Liu CY, Thompson P, Tu Z. Agreement-based semi-supervised learning for skull stripping. Med Image Comput Comput Assist Interv. 2010;13(Pt 3):147-54. DOI: 10.1007/978-3-642-15711-0_19. PMID: 20879394.
• Hsu W, Taira RK. Tools for improving the characterization and visualization of changes in neuro-oncology patients. AMIA Annu Symp Proc. 2010 Nov 13;2010:316-20. PMID: 21346992; PMCID: PMC3041412.
• Arnold CW, El-Saden SM, Bui AA, Taira R. Clinical Case-based Retrieval Using Latent Topic Analysis. AMIA Annu Symp Proc. 2010 Nov 13;2010:26-30. PMID: 21346934; PMCID: PMC3041464.
• Suh M-kyung, Lee KJ, Heu A, Nahapetian A, Sarrafzadeh M. Bayesian networks-based interval training guidance system for cancer rehabilitation. Mobile Computing, Applications, and Services. Springer; 2010. p. 236-253.
• Suh M-kyung, Evangelista LS, Chen CA, Han K, Kang J, Tu MK, Chen V, Nahapetian A, Sarrafzadeh M. An automated vital sign monitoring system for congestive heart failure patients. Proceedings of the ACM international conference on Health informatics – IHI\textquoteright10. Association for Computing Machinery (ACM); 2010. DOI: 10.1145/1882992.1883010.
• Au LK, Batalin MA, Jordan B, Xu C, Bui AAT, Dobkin B, Kaiser WJ. Demonstration of WHI-FIT: A Wireless-enabled Cycle Restorator. Wireless Health 2010. New York, NY, USA: ACM; 2010. DOI: 10.1145/1921081.1921106.
• Iglesias JE, Dinov I, Singh J, Tong G, Tu Z. Synthetic MRI signal standardization: application to multi-atlas analysis. Med Image Comput Comput Assist Interv. 2010;13(Pt 3):81-8. DOI: 10.1007/978-3-642-15711-0_11. PMID: 20879386.
• Taira RK. Natural Language Processing of Medical Reports. Medical Imaging Informatics. Springer; 2010. p. 257-298.
• Tong M, Wu JA, Chae S, Chern A, Speier W, Hsu W, Taira RK. Computer-assisted systematic review and interactive visualization of published literature. RSNA Annual Meeting. 2010.
• Suh M-kyung, Evangelista LS, Chen V, Hong WS, Macbeth J, Nahapetian A, Figueras FJ, Sarrafzadeh M. WANDA B.: Weight and activity with blood pressure monitoring system for heart failure patients. 2010 IEEE International Symposium on “A World of Wireless, Mobile and Multimedia Networks” (WoWMoM). Institute of Electrical & Electronics Engineers (IEEE); 2010. DOI: 10.1109/wowmom.2010.5534983.
• Jahanshad N, Stein JL, McMahon KL, Zubicaray GI de, Wright MJ, Hickie I, Toga AW, Thompson P. White Matter Development and Asymmetry Mapped using DTI in 12-21 Year Old Twins. Organization for Human Brain Mapping. 2010.
• Aberle DR, El-Saden S, Abbona P, Gomez A, Motamedi K, Ragavendra N, Bassett L, Seeger L, Brown M, Brown K, others. A primer on imaging anatomy and physiology. Medical Imaging Informatics. Springer; 2010. p. 15-90.
• Jahanshad N, Lee AD, Barysheva M, McMahon KL, de Zubicaray GI, Martin NG, Wright MJ, Toga AW, Thompson PM. Genetic influences on brain asymmetry: a DTI study of 374 twins and siblings. Neuroimage. 2010 Aug 15;52(2):455-69. DOI: 10.1016/j.neuroimage.2010.04.236. Epub 2010 Apr 27. PMID: 20430102; PMCID: PMC3086641.
• Watt E, Arnold CW, Sayre JW. Evaluation. Medical Imaging Informatics. Springer; 2010. p. 403-438.
• Taira RK, Iglesias JE, Jahanshad N. Characterizing Imaging Data. Medical Imaging Informatics. Springer; 2010. p. 197-255.
• Bui AAT, Taira RK, Kangarloo H. Introduction. Medical Imaging Informatics. Springer; 2010. p. 3-13.
• Iglesias JE, Thompson P, Liu C-Y, Tu Z. Discretizing stochastic tractography: A fast implementation. IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010. Rotterdam, 2010, pp. 1381-1384. DOI: 10.1109/ISBI.2010.5490255.
• Jahanshad N, Stein JL, Thomason ME, McMahon KL, Zubicaray GI de, Martin NG, Wright MJ, Toga AW, Thompson P. Boosting power to detect genes that influence fiber tracts. Proc Organization for Human Brain Mapping. 2010.
• Bui AAT, Taira RK. Organizing Observations: Data Models. Medical Imaging Informatics. Springer; 2010. p. 299-331.
• Bui AAT, Morioka CA. Information Systems & Architectures. Medical Imaging Informatics. Springer; 2010. p. 93-137.
• Shpitser I. Disease models, part I: Graphical models. Medical Imaging Informatics. Springer; 2010. p. 335-369.
• Jahanshad N, Zhan L, Bernstein M, Borowski BJ, Jack Jr CR, Toga AW, Thompson P, others. Diffusion tensor imaging in seven minutes: determining trade-offs between spatial and directional resolution. IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010. IEEE; Rotterdam, 2010, pp. 1161-1164.
• Woodbridge J, Bui AAT, Sarrafzadeh M. Linear Frequency Estimation Technique for Reducing Frequency Based Signals. Int Conf Pervasive Technol Relat Assist Environ. 2010 Jun;2010:54. DOI: 10.1145/1839294.1839359. PMID: 27752183; PMCID: PMC5040367.
• Hsu W, Bui AAT. Disease Models, Part II: Querying & Applications. Medical Imaging Informatics. Springer; 2010. p. 371-401. DOI: 10.1007/978-1-4419-0385-3_9.

• Au LK, Batalin MA, Stathopoulos T, Bui AAT, Kaiser WJ. Episodic sampling: towards energy-efficient patient monitoring with wearable sensors. Conf Proc IEEE Eng Med Biol Soc. 2009;2009:6901-5. DOI: 10.1109/IEMBS.2009.5333615. PMID: 19964452; PMCID: PMC5019958.
• Singleton KW, Garcia-Gathright JI, Burns B, Rocks K, Iglesias JE, Bui AAT. Semi-automated medical text and image selection for multimedia presentation at tumor board reviews. Radiological Society of North America. Chicago, United Stats of America: Radiological Society of North America; 2009.
• Iglesias JE, Karssemeijer N. Robust initial detection of landmarks in film-screen mammograms using multiple FFDM atlases. IEEE Trans Med Imaging. 2009 Nov;28(11):1815-24. DOI: 10.1109/TMI.2009.2025036. Epub 2009 Jun 10. PMID: 19520632.
• Iglesias JE, Rocks K, Jahanshad N, Frias-Martinez E, Andrada LP, Bui AAT. Tracking medication information across medical records. AMIA Annu Symp Proc. 2009 Nov 14;2009:266-70. PMID: 20351862; PMCID: PMC2815368.
• Arnold CW, Davis M, Knoop S, Gruhl D. A scalable architecture for medical report driven information retrieval. Proc AMIA Annu Symp. 2009.
• Hsu W, Bui AAT, Taira RK, Kangarloo H. Integrating imaging and clinical data for decision support. Handbook of Research on Advanced Techniques in Diagnostic Imaging and Biomedical Applications. 2009. p. 18-33. DOI: 10.4018/978-1-60566-314-2.ch002.
• Bashyam V, Taira RK. Incorporating Syntactic Dependency Information Towards Improved Coding of Lengthy Medical Concepts in Clinical Reports. Proceedings of the Workshop on Current Trends in Biomedical Natural Language Processing. Stroudsburg, PA, USA: Association for Computational Linguistics; 2009.
• Bui AAT, Hsu W. Chapter 4: Medical Data Visualization: Toward Integrated Clinical Workstations. Medical Imaging Informatics. 2010;:171-240. DOI: 10.1007/978-1-4419-0385-3_4.
• Jahanshad N, Shikuma CM, Kallianpur K, Nakamoto B, Valcour VG, Thompson P, Francisco CA. Impact of cerebrovascular risk factors on brain function and structure in HIV-infected individuals. Antivir Ther. 2009.
• Suh M-kyung, Rofouei M, Nahapetian A, Kaiser WJ, Sarrafzadeh M. Optimizing interval training protocols using data mining decision trees. Wearable and Implantable Body Sensor Networks, 2009 BSN 2009 Sixth International Workshop on. IEEE; 2009.
• Suh M-kyung, Lee KJ, Nahapetian A, Sarrafzadeh M. Interval training guidance system with music and wireless group exercise motivations. IEEE International Symposium on Industrial Embedded Systems, 2009. IEEE; 2009, pp. 110-119.
• Moazeni M, Bui AAT, Sarrafzadeh M. Accelerating total variation regularization for matrix-valued images on GPUs. Proceedings of the 6th ACM conference on Computing frontiers. ACM; 2009
• Iglesias JE, Thompson P, Tu Z. A spatially variant mixture model for diffusion weighted MRI- application to image denoising. MICCAI Workshop on Probabilistic Models for Medical Image Analysis. Citeseer; 2009.
• Jahanshad N, Lee AD, Lepore N, Chou YY, Brun C, Barysheva M, Toga AW, McMahon KL, de Zubicaray GI, Wright MJ, Sapiro G, Lenglet C, Thompson PM. Reducing structural variation to determine the genetics of white matter integrity across hemispheres-A DTI study of 100 twins. Proc IEEE Int Symp Biomed Imaging. 2009 Jun-Jul;2009:819-822. DOI: 10.1109/ISBI.2009.5193175. Epub 2009 Aug 7. PMID: 29805733; PMCID: PMC5964988.
• Moazeni M, Bui AAT, Sarrafzadeh M. A memory optimization technique for software-managed scratchpad memory in GPUs. IEEE 7th Symposium on Application Specific Processors, 2009. IEEE; San Francisco, CA, 2009, pp. 43-49.
• Jahanshad N, Lee AD, Leporé N, Chou YY, Brun CC, Barysheva M, Toga AW, McMahon KL, de Zubicaray GI, Wright MJ, Thompson PM. Genetics of anisotropy asymmetry: registration and sample size effects. Med Image Comput Comput Assist Interv. 2009;12(Pt 2):498-505. DOI: 10.1007/978-3-642-04271-3_61. PMID: 20426149.
• Watt E, Hsu W, Bui AAT. Visualizing the evolution of clinical features in cancer: Mapping trends to disease outcome for prediction. Radiological Sciences of North America (RSNA). 2009.
• Wong YN, Meropol NJ, Speier W, Sargent D, Goldberg RM, Beck JR. Cost implications of new treatments for advanced colorectal cancer. Cancer. 2009 May 15;115(10):2081-91. DOI: 10.1002/cncr.24246. PMID: 19309745; PMCID: PMC2875773.
• Hsu W, Antani S, Long LR, Neve L, Thoma GR. SPIRS: a Web-based image retrieval system for large biomedical databases. Int J Med Inform. 2009 Apr;78 Suppl 1(Suppl 1):S13-24. DOI: 10.1016/j.ijmedinf.2008.09.006. Epub 2008 Nov 8. PMID: 18996737; PMCID: PMC2693318.
• Bashyam V, Hsu W, Watt E, Bui AAT, Kangarloo H, Taira RK. Problem-centric organization and visualization of patient imaging and clinical data. Radiographics. 2009 Mar-Apr;29(2):331-43. DOI: 10.1148/rg.292085098. Epub 2009 Jan 23. PMID: 19168763; PMCID: PMC2678554.

• Watt EW, Bui AAT. Evaluation of a dynamic bayesian belief network to predict osteoarthritic knee pain using data from the osteoarthritis initiative. AMIA Annu Symp Proc. 2008 Nov 6;2008:788-92. PMID: 18999030; PMCID: PMC2656041.
• Taira RK, Bui AAT, Hsu W, Bashyam V, Dube S, Watt E, Andrada LP, El-Saden S, Cloughesy T, Kangarloo H. A tool for improving the longitudinal imaging characterization for neuro-oncology cases. AMIA Annu Symp Proc. 2008 Nov 6;2008:712-6. PMID: 18999139; PMCID: PMC2656085.
• Son RY, Taira RK, Kangarloo H, Cárdenas AF. Context-sensitive correlation of implicitly related data: an episode creation methodology. IEEE Trans Inf Technol Biomed. 2008 Sep;12(5):549-60. DOI: 10.1109/TITB.2008.917901. PMID: 18779069.
• Wu WH, Au LK, Jordan B, Stathopoulos T, Batalin MA, Kaiser WJ, Vahdatpour A, Sarrafzadeh M, Fang M, Chodosh J. The SmartCane System: An Assistive Device for Geriatrics. Proceedings of the ICST 3rd International Conference on Body Area Networks. ICST, Brussels, Belgium, Belgium: ICST (Institute for Computer Sciences, Social-Informatics and Telecommunications Engineering); 2008.
• Corso JJ, Sharon E, Dube S, El-Saden S, Sinha U, Yuille A. Efficient multilevel brain tumor segmentation with integrated bayesian model classification. IEEE Trans Med Imaging. 2008 May;27(5):629-40. DOI: 10.1109/TMI.2007.912817. PMID: 18450536.
• Au LK, Wu WH, Batalin MA, Kaiser WJ. Active guidance towards proper cane usage. Medical Devices and Biosensors, 2008 ISSS-MDBS 2008 5th International Summer School and Symposium on. IEEE; 2008.
• Tameem HZ, Dube S, Sinha U. Content based image retrieval applied to contrast enhancing brain tumors. Proc SPIE Medical Imaging: PACS and Imaging Informatics. San Diego, CA: SPIE; 2008. DOI: 10.1117/12.771030.
• Dube S, Corso JJ, Yuille AL, Cloughesy TF, El-Saden S, Sinha U. Hierarchical segmentation of malignant gliomas via integrated contextual filter response. 2008. DOI: 10.1117/12.770769.
• Morioka CA, El-Saden S, Pope W, Sayre J, Duckwiler G, Meng F, Bui AAT, Kangarloo H. A methodology to integrate clinical data for the efficient assessment of brain-tumor patients. Inform Health Soc Care. 2008 Mar;33(1):55-68. DOI: 10.1080/17538150801956762. PMID: 18604762.
• D’Avolio LW, Litwin MS, Rogers SO Jr, Bui AAT. Facilitating Clinical Outcomes Assessment through the automated identification of quality measures for prostate cancer surgery. J Am Med Inform Assoc. 2008 May-Jun;15(3):341-8. DOI: 10.1197/jamia.M2649. Epub 2008 Feb 28. PMID: 18308980; PMCID: PMC2410000.
• D’Avolio LW, Bui AA. The Clinical Outcomes Assessment Toolkit: a framework to support automated clinical records-based outcomes assessment and performance measurement research. J Am Med Inform Assoc. 2008 May-Jun;15(3):333-40. DOI: 10.1197/jamia.M2550. Epub 2008 Feb 28. PMID: 18308990; PMCID: PMC2410004.
• Au LK, Wu WH, Batalin MA, Stathopoulos T, Kaiser WJ, others. Demonstration of active guidance with SmartCane. International Conference on Information Processing in Sensor Networks, 2008. IEEE; St. Louis, MO, 2008, pp.537-538.
• Wu WH, Bui AAT, Batalin MA, Au LK, Binney JD, Kaiser WJ. MEDIC: medical embedded device for individualized care. Artif Intell Med. 2008 Feb;42(2):137-52. DOI: 10.1016/j.artmed.2007.11.006. Epub 2008 Jan 18. PMID: 18207716.

• Wu WH, Batalin MA, Au LK, Bui AA, Kaiser WJ. Context-aware sensing of physiological signals. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:5271-5. DOI: 10.1109/IEMBS.2007.4353531. PMID: 18003197.
• Dube S, Corso JJ, Cloughesy TF, El-Saden S, Yuille AL, Sinha U. Automated MR image processing and analysis of malignant brain tumors: enabling technology for data mining. Data Mining, Systems Analysis, and Optimization in Biomedicine(AIP Conference Proceedings Volume 953). 2007. DOI: 10.1063/1.2817354.
• Tameem HZ, Selva LE, Sinha US. Texture measure from low resolution MR images to determine trabecular bone integrity in osteoporosis. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2027-30. DOI: 10.1109/IEMBS.2007.4352717. PMID: 18002383.
• D’Avolio LW, Litwin MS, Rogers SO Jr, Bui AA. Automatic identification and classification of surgical margin status from pathology reports following prostate cancer surgery. AMIA Annu Symp Proc. 2007 Oct 11;2007:160-4. PMID: 18693818; PMCID: PMC2655919.
• Wu WH, Bui AAT, Batalin MA, Liu D, Kaiser WJ. Incremental diagnosis method for intelligent wearable sensor systems. IEEE Trans Inf Technol Biomed. 2007 Sep;11(5):553-62. DOI: 10.1109/titb.2007.897579. PMID: 17912972.
• Tameem HZ, Sinha U. Trabecular Bone Analysis: Correlation of 3D Structural Features with 3D Texture Analysis. Proc Joint Annual Meeting International Society of Magnetic Resonance Imaging-European Society of Magnetic Resonance Imaging in Biology. Berlin, Germany: International Society of Magnetic Resonance Imaging-European Society of Magnetic Resonance Imaging in Biology; 2007.
• Tameem HZ, Ardekani S, Sinha U. MR bone atlases for shape characterization. Proc Joint Annual Meeting International Society of Magnetic Resonance Imaging-European Society of Magnetic Resonance Imaging in Biology. Berlin, Germany: International Society of Magnetic Resonance Imaging-European Society of Magnetic Resonance Imaging in Biology; 2007.
• Dube S, El-Saden S, Cloughesy TF, Sinha U. Content-based Image Retrieval of Glioblastoma Multiforme. Medinfo 2007: Proceedings of the 12th World Congress on Health (Medical) Informatics. 2007.
• Arnold CW, Corso JJ, Bui AAT. An unsupervised approach to automatic image annotation. NSF Biomedical Informatics Workshop: Expanding Secondary Use of Health Data. Portland, OR; 2007.
• Bashyam V, Morioka CA, El-Saden S, Bui AAT, Taira RK. Identifying relevant medical reports from an assorted report collection using the naı̈ve Bayes classifier and the UMLS. Indian Journal of Medical Informatics. 2007;2.
• Christiansen O, Lee TM, Lie J, Sinha U, Chan TF. Total variation regularization of matrix-valued images. Int J Biomed Imaging. 2007;2007:27432. DOI: 10.1155/2007/27432. PMID: 18256729; PMCID: PMC1994779.
• Bashyam V, Taira RK. Identifying Anatomical Phrases in Clinical Reports by Shallow Semantic Parsing Methods. Computational Intelligence and Data Mining, 2007 CIDM 2007 IEEE Symposium on. IEEE; 2007.
• Tameem HZ, Sinha US. MR atlas for articular cartilage morphology: potential to detect shape differences. Stud Health Technol Inform. 2007;129(Pt 2):1329-33. PMID: 17911930.
• Tameem HZ, Selva LE, Sinha US. Morphological atlases of knee cartilage: shape indices to analyze cartilage degradation in osteoarthritic and non-osteoarthritic population. Conf Proc IEEE Eng Med Biol Soc. 2007;2007:1310-3. DOI: 10.1109/IEMBS.2007.4352538. PMID: 18002204.
• Taira RK, Bashyam V, Kangarloo H. A field theoretical approach to medical natural language processing. IEEE Trans Inf Technol Biomed. 2007 Jul;11(4):364-75. DOI: 10.1109/titb.2006.884368. PMID: 17674619.
• Arnold CW, Bui AAT, Morioka CA, El-Saden S, Kangarloo H. Informatics in radiology: A prototype Web-based reporting system for onsite-offsite clinician communication. Radiographics. 2007 Jul-Aug;27(4):1201-11. DOI: 10.1148/rg.274065124. PMID: 17620477.
• Bui AAT, Aberle DR, Kangarloo H. TimeLine: visualizing integrated patient records. IEEE Trans Inf Technol Biomed. 2007 Jul;11(4):462-73. DOI: 10.1109/titb.2006.884365. PMID: 17674629.
• Bashyam V, Divita G, Browne A. Extracting biomedical entities from free text to facilitate secondary use of clinical reports. NSF Biomedical Informatics Workshop: Expanding Secondary Use of Health Data. Corbett, OR; 2007.
• Wu WH, Batalin MA, Bui AAT, Sarrafzadeh M, Kaiser WJ. A Novel Method and Testbed for Sensor Management and Patient Diagnosis. Proc Joint Workshop On High Confidence Medical Devices, Software, and Systems (HCMDSS) and Medical Device Plug-and-Play (MD PnP) Interoperability (HCMDSS/MD PnP\textquoteright07). Boston, MA: IEEE; 2007.
• Tameem HZ, Morioka CA, Bennett D, El-Saden S, Sinha U, Taira RK, Bui AAT, Kangarloo H. Development of an indexed integrated neuroradiology reports for teaching file creation. Proceedings of SPIE. San Diego, CA: SPIE Medical Imaging; 2007.
• Dube S, Cloughesy TF, Sayre JW, Sinha U. Multivariate linear modeling of quantitative MR features for prognosis in patients with glioblastoma multiforme. Proc Joint Annual Meeting International Society of Magnetic Resonance Imaging-European Society of Magnetic Resonance Imaging in Biology. Berlin, Germany: International Society of Magnetic Resonance Imaging-European Society of Magnetic Resonance Imaging in Biology; 2007.
• Hsu W, Aberle DR, El-Saden S, Kangarloo H, Bui AAT. A visual query application for interacting with a probabilistic model of tumor image features. RSNA. Chicago, IL, 2007.
• Shpitser I, Pearl J. What Counterfactuals Can Be Tested. Uncertainty in Artificial Intelligence. Vancouver, Canada; 2007.
• Bashyam V, Divita G, Bennett DB, Browne AC, Taira RK. A normalized lexical lookup approach to identifying UMLS concepts in free text. Stud Health Technol Inform. 2007;129(Pt 1):545-9. PMID: 17911776.
• Morioka CA, Dionisio JD, Bui AAT, El-Saden S, Kangarloo H. StructConsult: structured real-time wet read consultation infrastructure to support patient care. Stud Health Technol Inform. 2007;129(Pt 1):429-33. PMID: 17911753.
• Bui AAT, Morioka CA, Dionisio JD, Johnson DB, Sinha U, Ardekani S, Taira RK, Aberle DR, El-Saden S, Kangarloo H. OpenSourcePACS: an extensible infrastructure for medical image management. IEEE Trans Inf Technol Biomed. 2007 Jan;11(1):94-109. DOI: 10.1109/titb.2006.879595. PMID: 17249408.
• Krupinski EA, Kallergi M. Choosing a radiology workstation: technical and clinical considerations. Radiology. 2007 Mar;242(3):671-82. DOI: 10.1148/radiol.2423051403. Epub 2007 Jan 17. PMID: 17229874.

• Ardekani S, Sinha U. Statistical representation of mean diffusivity and fractional anisotropy brain maps of normal subjects. J Magn Reson Imaging. 2006 Dec;24(6):1243-51. DOI: 10.1002/jmri.20745. PMID: 17083103.
• Ardekani S, Kumar A, Bartzokis G, Sinha U. Exploratory voxel-based analysis of diffusion indices and hemispheric asymmetry in normal aging. Magn Reson Imaging. 2007 Feb;25(2):154-67. DOI: 10.1016/j.mri.2006.09.045. Epub 2006 Dec 6. PMID: 17275609.
• Ardekani S, Selva L, Sayre J, Sinha U. Quantitative metrics for evaluating parallel acquisition techniques in diffusion tensor imaging at 3 Tesla. Invest Radiol. 2006 Nov;41(11):806-14. DOI: 10.1097/01.rli.0000242859.75922.be. PMID: 17035871.
• Hsu W, Bui AAT. A framework for visually querying a probabilistic model of tumor image features. AMIA Annu Symp Proc. 2006;2006:354–8.
• Dube S, El-Saden S, Cloughesy TF, Sinha U. Content based image retrieval for MR image studies of brain tumors. Conf Proc IEEE Eng Med Biol Soc. 2006;2006:3337-40. DOI: 10.1109/IEMBS.2006.260262. PMID: 17946561.
• Grinstead J, Sinha U, Sinha S. Application of a wavelet packet denoising algorithm to diffusion tensor imaging. Journal of Magnetic Resonance Imaging. 2006;24:182\textendash190
• Sinha S, Sinha U, Edgerton VR. In vivo diffusion tensor imaging of the human calf muscle. J Magn Reson Imaging. 2006 Jul;24(1):182-90. DOI: 10.1002/jmri.20593. PMID: 16729262.
• Corso JJ, Sharon E, Yuille A. Multilevel segmentation and integrated bayesian model classification with an application to brain tumor segmentation. Med Image Comput Comput Assist Interv. 2006;9(Pt 2):790-8. DOI: 10.1007/11866763_97. PMID: 17354845.
• D’Avolio LW, Rees G, Boyadzhyan L. Improving the secondary utilization of clinical data by incorporating context. Proc ASIST pre-conference symposia. Austin; 2006.
• Hsu W, Dordoni A, El-Saden S, Bui AAT. A visual query interface for assisting in decision support of tumors using image findings structured by Bayesian networks. Proc ARRS. Vancouver, Canada; 2006. p. A31.
• Lee TM, Sinha U. Denoising diffusion tensor images: preprocessing for automated detection of subtle diffusion tensor abnormalities between populations. Proc SPIE Medical Imaging. 2006. DOI: 10.1117/12.654264.

• Ardekani S, Sinha U. Geometric distortion correction of high-resolution 3 T diffusion tensor brain images. Magn Reson Med. 2005 Nov;54(5):1163-71. DOI: 10.1002/mrm.20651. PMID: 16187289.
• Shah SK, Kleerup EC, Arroyo LL, Lindberg DC, Wakeman KS, Bui AAT. A structured radiologic, pathologic, and clinical teaching file for thoracic diseases. Radiological Society of North America. McCormick Place, Chicago; 2005.
• Morioka CA, El-Saden S, Pope W, Duckwiler G, Bui AAT, Kangarloo H. Integration of HIS/RIS clinical document with PACS image studies for neuroradiology. The International Society for Optical Engineering (SPIE) International Symposium on Medical Imaging. 2005. DOI: 10.1117/12.595920.
• Meng F, Taira RK, Bui AA, Kangarloo H, Churchill BM. Automatic generation of repeated patient information for tailoring clinical notes. Int J Med Inform. 2005 Aug;74(7-8):663-73. DOI: 10.1016/j.ijmedinf.2005.03.008. PMID: 16043089.
• Meng F, D’Avolio LW, Chen AA, Taira RK, Kangarloo H. Generating models of surgical procedures using UMLS concepts and multiple sequence alignment. AMIA Annu Symp Proc. 2005;2005:520-4. PMID: 16779094; PMCID: PMC1560888.
• Bui AAT, Morioka CA, Dionisio J. openPACS: An open-source PACS for evidence-based medical practice, research, and education. Radiological Society of North America. Chicago, IL: RSNA; 2005.
• Bashyam V, Taira RK. Indexing anatomical phrases in neuro-radiology reports to the UMLS 2005AA. AMIA Annu Symp Proc. 2005;2005:26-30. PMID: 16778995; PMCID: PMC1560562.
• Cho PS, Taira RK, Kangarloo H. Syntactic parsing of medical reports using evolutionary optimization. AMIA Annu Symp Proc. 2005;2005:920. PMID: 16779207; PMCID: PMC1560622.
• Bashyam V, Taira RK. A study of lexical behaviour of sentences in chest radiology reports. AMIA Annu Symp Proc. 2005;2005:891. PMID: 16779178; PMCID: PMC1560599.
• Chen AA, Meng F, Morioka CA, Churchill BM, Kangarloo H. Automated generation of individually customized visualizations of diagnosis-specific medical information using novel techniques of information extraction. Proc The International Society for Optical Engineering (SPIE) International Symposium on Medical Imaging. San Diego, CA, USA: The International Society for Optical Engineering; 2005. p. 50. DOI: 10.1117/12.596149.

• Selva LE, Brennan M, Sinha U. Automated processing of diffusion tensor data for integration within a PAC system. Radiological Society of North America. 2004.
• Bui AAT, Taira RK, El-Saden S, Dordoni A, Aberle DR. Automated medical problem list generation: towards a patient timeline. Stud Health Technol Inform. 2004;107(Pt 1):587-91. PMID: 15360880.
• Meng F, Chen AA, Son RY, Taira RK, Churchill BM, Kangarloo H. Information Extraction Using Semantic Patterns for Populating Clinical Data Models. METMBS. 2004.
• Ardekani S, Sinha U. Quantitative assessment of parallel acquisition techniques in diffusion tensor imaging at 3.0 Tesla. Conf Proc IEEE Eng Med Biol Soc. 2004;2004:1072-5. DOI: 10.1109/IEMBS.2004.1403349. PMID: 17271868.
• Morioka CA, Sarnoski J, Taira RK, Bui AAT, Kangarloo H. Mapping GI/GU anatomical locations and conditions to UMLS and to an image model based on the Visual Human male dataset. Radiological Society of North America. 2004.
• Selva LE, Brennan M, Sinha U. Automated processing of diffusion tensor data for integration within a PAC system. IEEE METMBS Conference. 2004.
• Son RY, Meng F, Chen AA, Taira RK, Kangarloo H. Towards Semantics-Based Intra-Document Coreference Resolution. METMBS. 2004.
• Sinha S, Sinha U. In vivo diffusion tensor imaging of the human prostate. Magn Reson Med. 2004 Sep;52(3):530-7. DOI: 10.1002/mrm.20190. PMID: 15334571.
• Yu NC, Choi JW, Morioka CA, Lu DSK, Kim YJ, Raman SS, Bui AAT. Hepatocellular Carcinoma TimeLine: A visualization paradigm for the follow-up of the effect of minimally invasive therapy. Radiological Society of North America. McCormick Place, Chicago; 2004.
• Meng F, Taira RK, Bui AAT, Kangarloo H, Churchill BM. Automatic generation of repeated patient information for tailoring clinical notes. Stud Health Technol Inform. 2004;107(Pt 1):653-7. PMID: 15360894.
• Chen AA, Meng F, Son RY, Taira RK, Churchill BM, Kangarloo H. Framework for the automated validation of nomograms for the prediction of cancer outcomes. Proc IEEE METMBS Conference. Las Vegas; 2004.
• Sinha U, Ardekani S. Parametric brain MR atlases: standardization for imaging informatics. Stud Health Technol Inform. 2004;107(Pt 2):1374-8. PMID: 15361040.
• Chen AA, Dionisio J, Meng F, Churchill BM, Kangarloo H. Automated generation of diagnosis-specific visualizations of electronic medical record data for pediatric patients with neurogenic bladder. Proc Intl Medical Informatics Assoc (MedInfo). San Francisco; 2004.
• Cho PS, Taira RK, Bui AAT, Kangarloo H. Construction of Knowledge Frames for Medical Reports. Proc Intl Medical Informatics Assoc (MedInfo). San Francisco; 2004.
• Ardekani S, Sinha U. Constrained free form deformation based algorithm for geometric distortion correction of echo planar diffusion tensor images. 2004 2nd IEEE International Symposium on Biomedical Imaging: Macro to Nano. Washington, DC, USA: IEEE; 2004. p. 340–343. DOI: 10.1109/ISBI.2004.1398544.
• Son RY, Taira RK, Kangarloo H. Inter-document coreference resolution of abnormal findings in radiology documents. Stud Health Technol Inform. 2004;107(Pt 2):1388-92. PMID: 15361043.
• Selva LE, El-Saden S, Sayre JW, Kangarloo H, Sinha U. Automated decision support for brain MRI protocol selection. Proc IEEE METMBS. 2004. p. 23–30.
• Bui AAT, Taira RK, Goldman D, Dionisio JD, Aberle DR, El-Saden S, Sayre J, Rice T, Kangarloo H. Effect of an imaging-based streamlined electronic healthcare process on quality and costs. Acad Radiol. 2004 Jan;11(1):13-20. DOI: 10.1016/s1076-6332(03)00570-1. PMID: 14746397.

• Morioka CA, El-Saden S, Duckwiler G, Zou Q, Ying R, Bui A, Johnson D, Kangarloo H. Workflow management of HIS/RIS textual documents with PACS image studies for neuroradiology. AMIA Annu Symp Proc. 2003;2003:475-9. PMID: 14728218; PMCID: PMC1479917.
• Ardekani S, Sinha U. Diffusion model based non-linear warping for distortion corrections in diffusion tensor images. Proc Intl Soc Mag Reson Med. 2003.
• Sinha U, El-Saden S, Duckwiler G, Thompson L, Ardekani S, Kangarloo H. A customizable MR brain imaging atlas of structure and function for decision support. AMIA Annu Symp Proc. 2003;2003:604-8. PMID: 14728244; PMCID: PMC1480102.
• Zou Q, Chu WW, Morioka CA, Leazer GH, Kangarloo H. IndexFinder: a method of extracting key concepts from clinical texts for indexing. AMIA Annu Symp Proc. 2003;2003:763-7. PMID: 14728276; PMCID: PMC1480259.
• Cho PS, Taira RK, Kangarloo H. Automatic section segmentation of medical reports. AMIA Annu Symp Proc. 2003;2003:155-9. PMID: 14728153; PMCID: PMC1479978.
• Taira RK, Cho PS, Kangarloo H. Natural language processing of GU radiology reports. Radiological Society of North America. Chicago, IL: RSNA; 2003
• Son RY, Taira RK, Bui AAT, Cardenas AF, Kangarloo H. Imaging-based episode creation. Radiological Society of North America. Chicago, IL: RSNA; 2003.
• Sinha U, Thompson LL, El-Saden S, Ardekani S, Dionisio J, Kangarloo H. Automated MR brain image study summarization. Radiological Society of North America. Chicago, IL: RSNA; 2003.
• Liu VZ, Mao W, Zou Q, Chu W, Kangarloo H. A knowledge-based approach for scenario-specific medical free-text retrieval. Radiological Society of North America. Chicago, IL: RSNA; 2003.
• Dionisio J, Bui AAT, Ying R, Morioka CA, Kangarloo H. A gesture-driven user interface for medical image viewing. Radiological Society of North America. Chicago, IL: RSNA; 2003.
• Bui AAT, Taira RK, Dionisio J, Aberle DR, Kangarloo H. Problem-centric visualization of an imaging-based electronic medical record. Radiological Society of North America. Chicago, IL: RSNA; 2003.

• Dionisio JD, Bui AAT, Johnson D, Thompson LL, Sinha U. Designing a patient education framework via use case analysis. Ann N Y Acad Sci. 2002 Dec;980:225-35. DOI: 10.1111/j.1749-6632.2002.tb04899.x. PMID: 12594092.
• Sinha S, Sinha U. Functional magnetic resonance of human breast tumors: diffusion and perfusion imaging. Ann N Y Acad Sci. 2002 Dec;980:95-115. DOI: 10.1111/j.1749-6632.2002.tb04891.x. PMID: 12594084.
• Sinha U, Kangarloo H. Image study summarization of MR brain images by automated localization of relevant structures. Ann N Y Acad Sci. 2002 Dec;980:278-86. DOI: 10.1111/j.1749-6632.2002.tb04904.x. PMID: 12594097.
• Morioka CA, Sinha U, Taira RK, El-Saden S, Duckwiler G, Kangarloo H. Structured reporting in neuroradiology. Ann N Y Acad Sci. 2002 Dec;980:259-66. DOI: 10.1111/j.1749-6632.2002.tb04902.x. PMID: 12594095.
• Bui AAT, Taira RK, Churchill B, Kangarloo H. Integrated visualization of problemcentric urologic patient records. Ann N Y Acad Sci. 2002 Dec;980:267-77. DOI: 10.1111/j.1749-6632.2002.tb04903.x. PMID: 12594096.
• Sinha U, Bui AAT, Taira RK, Dionisio J, Morioka CA, Johnson D, Kangarloo H. A review of medical imaging informatics. Ann N Y Acad Sci. 2002 Dec;980:168-97. DOI: 10.1111/j.1749-6632.2002.tb04896.x. PMID: 12594089.
• Bui AAT, Weinger GS, Barretta SJ, Dionisio JD, Kangarloo H. An XML Gateway to Patient Data for Medical Research Applications. Ann N Y Acad Sci. 2002 Dec;980:236-46. DOI: 10.1111/j.1749-6632.2002.tb04900.x. PMID: 12594093.
• Son RY, Taira RK, Bui AAT, Kangarloo H, Cardenas AF. A Probabilistic Model for Constructing Healthcare Episodes. Proc METMBS 2002. 2002;:3\textendash10.
• Bui AAT, Taira RK, Morioka CA, Hall T, Boechat IM, Sayre JW, Leazer GH, Kangarloo H. A multimedia record for pediatric patients. Proc Mathematics and Engineering Techniques in Medicine and the Biological Sciences (METMBS). Mathematics and Engineering Techniques in Medicine and the Biological Sciences (METMBS); 2002.
• Taira RK, Bui AA, Kangarloo H. Identification of patient name references within medical documents using semantic selectional restrictions. Proc AMIA Symp. 2002:757-61. PMID: 12463926; PMCID: PMC2244274.
• Johnson DB, Zou Q, Dionisio JD, Liu VZ, Chu WW. Modeling medical content for automated summarization. Ann N Y Acad Sci. 2002 Dec;980:247-58. DOI: 10.1111/j.1749-6632.2002.tb04901.x. PMID: 12594094.
• Sinha U, Kangarloo H. Principal component analysis for content-based image retrieval. Radiographics. 2002 Sep-Oct;22(5):1271-89. DOI: 10.1148/radiographics.22.5.g02se021271. PMID: 12235353.
• Son RY, Taira RK, Bui AAT, Kangarloo H, Cardenas AF. A context-sensitive methodology for automatic episode creation. Proc AMIA Symp. 2002:707-11. PMID: 12463916; PMCID: PMC2244249.
• Dionisio J, Johnson D, Bui AAT, Sinha U, Kangarloo H. A design for integrating parallel and overlapping software development projects. Proc Mathematics and Engineering Techniques in Medicine and the Biological Sciences. 2002.
• Ardekani S, Kangarloo H, Sinha U. Region based fuzzy clustering for automated brain segmentation. Engineering in Medicine and Biology, 2002 24th Annual Conference and the Annual Fall Meeting of the Biomedical Engineering Society EMBS/BMES Conference, 2002 Proceedings of the Second Joint. IEEE; 2002.
• Ardekani S, Sinha U. Non-linear warping integrating intensity matching for geometric distortion correction in DW-MRI. Biomedical Engineering Society (BMES). 2002.
• Dionisio J, Bui AAT, Johnson D, Thompson LL, Sinha U. A Java-based framework for maintaining patient education content. Ann of N Y Acad Sci. 2002. p. 226–235.
• Sinha S, Lucas-Quesada FA, Sinha U, DeBruhl N, Bassett LW. In vivo diffusion-weighted MRI of the breast: potential for lesion characterization. J Magn Reson Imaging. 2002 Jun;15(6):693-704. DOI: 10.1002/jmri.10116. PMID: 12112520.
• Bui AAT, Taira RK, Dionisio JD, Aberle DR, El-Saden S, Kangarloo H. Evidence-based radiology: requirements for electronic access. Acad Radiol. 2002 Jun;9(6):662-9. DOI: 10.1016/s1076-6332(03)80311-2. PMID: 12061740.
• Bui AAT, Dionisio JD, Morioka CA, Sinha U, Taira RK, Kangarloo H. DataServer: an infrastructure to support evidence-based radiology. Acad Radiol. 2002 Jun;9(6):670-8. DOI: 10.1016/s1076-6332(03)80312-4. PMID: 12061741.
• Close RA, Abbey CK, Morioka CA, Whiting JS. Evaluation of layer decomposition for multiframe quantitative coronary angiography. Med Phys. 2002 Mar;29(3):311-8. DOI: 10.1118/1.1449494. PMID: 11929013.
• Oshiro T, Sinha U, Lu D, Sinha S. Reduction of electronic noise from radiofrequency generator during radiofrequency ablation in interventional MRI. J Comput Assist Tomogr. 2002 Mar-Apr;26(2):308-16. DOI: 10.1097/00004728-200203000-00025. PMID: 11884792.
• Sinha U, Yao L. In vivo diffusion tensor imaging of human calf muscle. J Magn Reson Imaging. 2002 Jan;15(1):87-95. DOI: 10.1002/jmri.10035. PMID: 11793462.

• Close RA, Abbey CK, Morioka CA, Whiting JS. Accuracy assessment of layer decomposition using simulated angiographic image sequences. IEEE Trans Med Imaging. 2001 Oct;20(10):990-8. DOI: 10.1109/42.959296. PMID: 11686445.
• Sinha U, Kangarloo H. Relevant MR imaging selection by automated localization of structure. Proc Mathematics and Engineering Techniques in Medicine and the Biological Sciences (METMBS). 2001.
• Sinha S, Sinha U, Lucas-Quesada FA, DeBruhl N. Apparent diffusion coefficient of the normal prostate. 9th Intl Soc Mag Res Med (ISMRM) Meeting. 2001.
• Morioka CA, Bui AAT, Sinha U, El-Saden S, Duckwiler G. DICOM structured report hyperlinked to DICOM presentation state in neuroradiology. Radiological Society of North America (RSNA). 2001
• Morioka CA, Valentino DJ, Duckwiler G, El-Saden S, Sinha U, Bui AAT, Kangarloo H. Disease specific intelligent pre-fetch and hanging protocol for diagnostic neuroradiology workstations. Proc AMIA Symp. 2001:468-72. PMID: 11825232; PMCID: PMC2243500.
• Johnson D, Zou Q, Dionisio J, Chu W. Summarizing medical documents using multi-word combinations. Proc Mathematics and Engineering Techniques in Medicine and the Biological Sciences (METMBS). 2001. p. 401–407.
• Sinha U, Taira RK, Kangarloo H. Structure localization in brain images: application to relevant image selection. Proc AMIA Symp. 2001:622-6. PMID: 11837219; PMCID: PMC2243571.
• Bui AAT, McNitt-Gray MF, Goldin JG, Cardenas AF, Aberle DR. Problem-oriented prefetching for an integrated clinical imaging workstation. J Am Med Inform Assoc. 2001 May-Jun;8(3):242-53. DOI: 10.1136/jamia.2001.0080242. PMID: 11320069; PMCID: PMC131032.
• Sinha U, Ton A, Yaghmai A, Taira RK, Kangarloo H. Image content extraction: application to MR images of the brain. Radiographics. 2001 Mar-Apr;21(2):535-47. DOI: 10.1148/radiographics.21.2.g01mr18535. PMID: 11259717.
• Taira RK, Soderland SG, Jakobovits RM. Automatic structuring of radiology free-text reports. Radiographics. 2001 Jan-Feb;21(1):237-45. DOI: 10.1148/radiographics.21.1.g01ja18237. PMID: 11158658.

• Johnson D. Methods for domain-specific information retrieval. [PhD dissertation]. 2000.
• Gupta RK, Cloughesy TF, Sinha U, Garakian J, Lazareff J, Rubino G, Rubino L, Becker DP, Vinters HV, Alger JR. Relationships between choline magnetic resonance spectroscopy, apparent diffusion coefficient and quantitative histopathology in human glioma. J Neurooncol. 2000 Dec;50(3):215-26. DOI: 10.1023/a:1006431120031. PMID: 11263501.
• Lucas-Quesada FA, Sinha S, Sinha U. Apparent diffusion coefficient – An additional feature to increase specificity in the classification of breast lesions. 8th Intl Soc Mag Res Med Meeting (ISMRM). International Society of Magnetic Resonance in Medicine(ISMRM); 2000.
• Sinha U, Yaghmai A, Thompson L, Dai B, Taira RK, Dionisio JD, Kangarloo H. Evaluation of SNOMED3.5 in representing concepts in chest radiology reports: integration of a SNOMED mapper with a radiology reporting workstation. Proc AMIA Symp. 2000:799-803. PMID: 11079994; PMCID: PMC2243808.
• Sinha S, Lucas-Quesada FA, Sinha U, DeBruhl N. Use of apparent diffusion coefficient to enhance the specificity of MR imaging of breast lesions. European Radiology. 2000;10:F43–F44.
• Morioka CA, Abbey CK, Eckstein M, Close RA, Whiting JS, LeFree M. Simulating coronary arteries in x-ray angiograms. Med Phys. 2000 Oct;27(10):2438-44. DOI: 10.1118/1.1308280. PMID: 11099214.
• Dai BY, Sinha U, Taira RK, Thompson LL, Dionisio J, Kangarloo H. Free-text radiology reports to standardized structured representations: The next step. Decisions in Imaging Informatics. 2000;13:14–20.
• Sinha U, Dai B, Johnson DB, Taira RK, Dionisio J, Tashima G, Golamco M, Kangarloo H. Interactive software for generation and visualization of structured findings in radiology reports. AJR Am J Roentgenol. 2000 Sep;175(3):609-12. DOI: 10.2214/ajr.175.3.1750609. PMID: 10954439.
• Thompson LL, Sinha U, Madu E, Ratib OM, Dionisio J, Dai BY, Taira RK, Kangarloo H. Structured data entry for cardiology and cardiac imaging: user profile based templates. Mathematics and Engineering Techniques in Medicine and Biological Sciences (METMBS). 2000. p. 521–6.
• Valdez JA, Dionisio J, Golamco M, Son RY, Kangarloo H. Creation of a health services research client in a distributed telemedicine environment. Mathematics and Engineering Techniques in Medicine and Biological Sciences (METMBS). 2000. p. 505–512.
• Sinha U, Sinha S, Oshiro T. Temperature-Sensitive Magnetic Resonance Sequences. Open Field Magnetic Resonance Imaging. Springer; 2000. p. 95\textendash106. DOI: 10.1007/978-3-642-59581-3_9.
• Bui AAT. A multimedia data model with generalized stream constructs. [Doctoral Dissertation]. [Los Angeles]: University of California, Los Angeles; 2000.
• Dionisio J, Johnson D, Bui AAT, Son RY, Churchill BM, Kangarloo H. Individually tailored, multimedia physician-patient communication. Proc Mathematics and Engineering Techniques in Medicine and Biological Sciences (METMBS). Mathematics and Engineering Techniques in Medicine and Biological Sciences (METMBS); 2000. p. 513–520.
• Jakobovits R, Soderland SG, Taira RK, Brinkley JF. Requirements of a Web-based experiment management system. Proc AMIA Symp. 2000:374-8. PMID: 11079908; PMCID: PMC2243934.
• Dionisio JD, Taira RK, Sinha U, Johnson DB, Dai BY, Tashima GH, Blythe S, Johnson R, Kangarloo H. Teleradiology as a foundation for an enterprise-wide health care delivery system. Radiographics. 2000 Jul-Aug;20(4):1137-50. DOI: 10.1148/radiographics.20.4.g00jl321137. PMID: 10903702.
• Sinha U, Ton A, Taira RK, Kangarloo H. Structuring MR image datasets: Image content modeling. Radiological Society of North America (RSNA). Chicago, Illinois, USA: Radiological Society of North America (RSNA); 2000.
• Soderland SG, Taira RK, Jakobovits R, Warner A. Analysis of serial CT reports for pediatric patients with metastatic lung disease.Radiological Society of North America (RSNA). Chicago, Illinois, USA: Radiological Society of North America (RSNA); 2000. p. 704.
• Chu WW, Johnson DB, Kangarloo H. A medical digital library to support scenario and user-tailored information retrieval. IEEE Trans Inf Technol Biomed. 2000 Jun;4(2):97-107. DOI: 10.1109/4233.845202. PMID: 10866408.
• Kangarloo H, Valdez JA, Yao L, Chen S, Curran J, Goldman D, Sinha U, Dionisio JD, Taira RK, Sayre J, Seeger L, Johnson R, Barbaric Z, Steckel R. Improving the quality of care through routine teleradiology consultation. Acad Radiol. 2000 Mar;7(3):149-55. DOI: 10.1016/s1076-6332(00)80115-4. PMID: 10730809.
• Yao L, Sinha U. Imaging the microcirculatory proton fraction of muscle with diffusion-weighted echo-planar imaging. Acad Radiol. 2000 Jan;7(1):27-32. DOI: 10.1016/s1076-6332(00)80440-7. PMID: 10645455.

• Meng F. Formation of queries from natural language using a semantic model and statistical approaches. PhD Dissertation. University of California at Los Angeles; 1999.
• Sinha S, Oshiro T, Sinha U, Daniell AL, Lu D, Lufkin RB. MR contrast optimization for a breathold 3D sequence: Applications to cardiac imaging. 7th ed. International Society for Magnetic Resonance in Medicine (ISMRM). Philadelphia, Pennsylvania, USA: International Society for Magnetic Resonance in Medicine (ISMRM); 1999.
• Meng F. A Natural Language Interface for Information Retrieval from Forms on the World Wide Web. Proceedings of the 20th International Conference on Information Systems. Atlanta, GA, USA: Association for Information Systems; 1999.
• Daniell AL, Sinha S, Sinha U. A real-time, low-cost MR image reconstruction device: Applications to interventional MRI. Intl Soc Mag Res Med Meeting (ISMRM). 1999.
• Sinha U, Dai BY, Thompson LL, Taira RK, Dionisio J, Kangarloo H. Dictated radiology report to standardized representation. Radiological Society of North America (RSNA). Chicago, Illinois, USA: Radiological Society of North America (RSNA); 1999.
• Dionisio J, Johnson D, Bui AAT, Taira RK, Aberle DR, Kangarloo H. A systematic method for new technology integration into a distributed electronic infrastructure to improve quality of care. Radiological Society of North America (RSNA). Chicago, IL, USA: Radiological Society of North America (RSNA); 1999.
• Sinha U, Taira RK, Johnson D, JD D, Kangarloo H. Image content modeling for evidence based medical practice. Radiological Society of North America (RSNA). Chicago, Illinois, USA: Radiological Society of North America (RSNA); 1999.
• Son RY, Valdez JA, Sinha U, Cardenas AF, Taira RK, Kangarloo H. A health services research workstation and imaging based episode creator to facilitate evidence-based medical research. Radiological Society of North America (RSNA). Chicago, Illinois, USA: Radiological Society of North America (RSNA); 1999.
• Sinha S, Oshiro T, Ong K, Sinha U, Daniell AL, Lu D, Lufkin RB. In vivo laser ablation of a porcine model: Real-time temperature monitoring and tissue damage modeling. International Society for Magnetic Resonance in Medicine (ISMRM). Philadelphia, Pennsylvania, USA: International Society for Magnetic Resonance in Medicine (ISMRM); 1999.
• Sinha U, Dionisio J, Dai B, Tashima G, Valdez J, Kangarloo H. Decision Table Formalism for Guideline Representation of Cholesterol Management: Application to Patient/Physicians Collaborative Path for Risk Reduction of Heart Disease. Proc AMIA Symp. 1999:1163. PMCID: PMC2232831.
• Bui AAT, Aberle DR, Dionisio J, Son RY, McNitt-Gray MF, Cardenas AF. TimeLine: A platform-independent, configurable interface for problem-centric multimedia patient records. RSNA. 1999.
• Dai BY, Sinha US, Dionisio JDN, Tashima GH, Johnson R, Taira RK, Kangarloo H. Individually Tailored Time Management: Patient-Centric Scheduling. Proc AMIA Symp. 1999:1044. PMCID: PMC2232582.
• Dionisio JD, Sinha U, Dai B, Johnson DB, Taira RK. Initial experiences with building a health care infrastructure based on Java and object-oriented database technology. Proc AMIA Symp. 1999:515-9. PMID: 10566412; PMCID: PMC2232573.
• Sinha U, Taira RK, Dai BY, Soderland SG, Johnson D, Kangarloo H. Informatics for cancer clinical trials: Standardized, structured data entry. American Medical Informatics Association (AMIA). Washington, DC: American Medical Informatics Association (AMIA); 1999.
• Thompson LL, Sinha U, Ratib OM, Madu E, Dionisio J, Kangarloo H. Focused knowledge navigation implementing structured data entry for cardiology and cardiac imaging. Radiological Society of North America (RSNA). Chicago, Illinois, USA: Radiological Society of North America (RSNA); 1999. p. 580.
• Dai BY, Sinha US, Dionisio JDN, Tashima GH, Johnson R, Taira RK, Kangarloo H. Individually Tailored Time Management: Patient-Centric Scheduling. Proc AMIA Symp. 1999:1044. PMCID: PMC2232582.
• Bui AAT, Aberle DR, Goldin J, McNitt-Gray MF, Cardenas AF, Kleerup EC, Ratib OM. TimeLine: A multimedia, problem-centric visualization of patient records. Proc AMIA Symp. 1999. p. 1034.
• Sinha U, Sinha S, Chan J, Lufkin RB. In vivo measurements of trace diffusion coefficient in normal head and neck – Tetrahedrally encoded diffusion gradients with EPI. 7th ed. International Society for Magnetic Resonance in Medicine (ISMRM). Philadelphia, Pennsylvania, USA: International Society for Magnetic Resonance in Medicine (ISMRM); 1999.
• Valdez JA, Sinha U, Caruana R, Ratib OM, Madu E, Kangarloo H. Simulation model for evaluating diagnostic technologies used in the identification of acute cardiac ischemia. Radiological Society of North America (RSNA). Chicago, Illinois, USA: Radiological Society of North America (RSNA); 1999.
• Johnson D, Chu W. Using n-word combinations for domain specific information retrieval. The International Conference on Information Fusion. San Jose, California, USA: The International Conference on Information Fusion; 1999.
• Kangarloo H, Dionisio JD, Sinha U, Johnson D, Taira RK. Process models for telehealth: an industrial approach to quality management of distant medical practice. Proc AMIA Symp. 1999:545-9. PMID: 10566418; PMCID: PMC2232705.
• Taira RK, Soderland SG. A statistical natural language processor for medical reports. Proc AMIA Symp. 1999:970-4. PMID: 10566505; PMCID: PMC2232848.
• Dionisio J, Johnson D, Bui AAT, Son RY, Churchill BM, Kangarloo H. Individually tailored, multimedia physician-patient communication. Radiological Society of North America. 1999.
• Johnson D, Dionisio J, Sinha U, Ratib OM, Kangarloo H. Using digital ink for structured medical reporting. Radiological Society of North America. Chicago, Illinois, USA: Radiological Society of North America; 1999.
• Johnson DB, Chu WW, Dionisio JD, Taira RK, Kangarloo H. Creating and indexing teaching files from free-text patient reports. Proc AMIA Symp. 1999:814-8. PMID: 10566473; PMCID: PMC2232818.
• Johnson D, Dionisio J, Taira RK, Caruana R, Chu W, Kangarloo H. Tailoring medical literature searches to support evidence-based medical practice. Radiological Society of North America (RSNA). Chicago, Illinois, USA: Radiological Society of North America (RSNA); 1999.

• Bui AAT, Aberle DR, McNitt-Gray MF, Cardenas AF, Goldin J. The evolution of an integrated timeline for oncology patient healthcare. Proc AMIA Symp. 1998:165-9. PMID: 9929203; PMCID: PMC2232288.
• Chu W, Hsu C-C, Cardenas AF, Taira RK. Knowledge-based image retrieval with spatial and temporal constructs. Knowledge and Data Engineering, IEEE Transactions on. 1998;10:872\textendash888. DOI: 10.1109/69.738355.
• Sinha U, Dai BY, Kangarloo H, Taira RK, Johnson D, Golamco M. Using speech recognition and natural language processing for semi-automatic structured radiology reporting. Radiological Society of North America (RSNA). Chicago, IL, USA: Radiological Society of North America (RSNA); 1998.
• Johnson DB, Taira RK, Zhou W, Goldin JG, Aberle DR. Hyperad: augmenting and visualizing free text radiology reports. Radiographics. 1998 Mar-Apr;18(2):507-15. DOI: 10.1148/radiographics.18.2.9536493. PMID: 9536493.

• Johnson D, Taira RK, Cardenas AF, Aberle DR. Extracting information from free text radiology reports. Int J Digit Libr 1, 297–308 (1997). DOI: 10.1007/s007990050024.
• Sinha S, Oshiro T, Sinha U, Lufkin R. Phase imaging on a .2-T MR scanner: application to temperature monitoring during ablation procedures. J Magn Reson Imaging. 1997 Sep-Oct;7(5):918-28. DOI: 10.1002/jmri.1880070522. PMID: 9307920.
• Sinha S, Mather R, Sinha U, Goldin J, Fonarow G, Yoon HC. Estimation of the left ventricular ejection fraction using a novel multiphase, dark-blood, breath-hold MR imaging technique. AJR Am J Roentgenol. 1997 Jul;169(1):101-12. DOI: 10.2214/ajr.169.1.9207508. PMID: 9207508.

• Kangarloo H, Ho BK, Lufkin RB, Barbaric Z, Kirlew K, Yaghmai S, Scholem D, Steckel RJ. Effect of conversion from a fee-for-service plan to a capitation reimbursement system on a circumscribed outpatient radiology practice of 20,000 persons. Radiology. 1996 Oct;201(1):79-84. DOI: 10.1148/radiology.201.1.8816525. PMID: 8816525.
• Lucas-Quesada FA, Sinha U, Sinha S. Segmentation strategies for breast tumors from dynamic MR images. J Magn Reson Imaging. 1996 Sep-Oct;6(5):753-63. DOI: 10.1002/jmri.1880060508. PMID: 8890013.
• Dionisio JD, Cárdenas AF, Taira RK, Aberle DR, Chu WW, McNitt-Gray MF, Goldin J, Lufkin RB. A unified timeline model and user interface for multimedia medical databases. Comput Med Imaging Graph. 1996 Jul-Aug;20(4):333-46. DOI: 10.1016/s0895-6111(96)00023-7. PMID: 8954238.
• Kangarloo H, Taira RK. Tailoring managed care to needs of individuals. Diagn Imaging (San Franc). 1996 Aug;18(8):39-41, 43. PMID: 10160198.
• Sinha U, Sinha S. High speed diffusion imaging in the presence of eddy currents. J Magn Reson Imaging. 1996 Jul-Aug;6(4):657-66. DOI: 10.1002/jmri.1880060415. PMID: 8835960.
• Aberle DR, Dionisio JD, McNitt-Gray MF, Taira RK, Cárdenas AF, Goldin JG, Brown K, Figlin RA, Chu WW. Integrated multimedia timeline of medical images and data for thoracic oncology patients. Radiographics. 1996 May;16(3):669-81. DOI: 10.1148/radiographics.16.3.8897631. PMID: 8897631.
• Sinha S, Sinha U. Black blood dual phase turbo FLASH MR imaging of the heart. J Magn Reson Imaging. 1996 May-Jun;6(3):484-94. DOI: 10.1002/jmri.1880060312. PMID: 8724415.
• Taira RK, Johnson DB, Bhushan V, Rivera M, Wong C, Huang L, Aberle DR, Greaves M, Goldin JG. A concept-based retrieval system for thoracic radiology. J Digit Imaging. 1996 Feb;9(1):25-36. DOI: 10.1007/bf03168565. PMID: 8814766.

• Chu W, Cardenas AF, Taira RK. KMeD: a knowledge-based multimedia medical distributed database system. Inf Syst. 1995;20:75\textendash96. DOI: 10.1016/0306-4379(95)98556-S.
• Ho BK, Taira RK, Steckel RJ, Kangarloo H. Technical considerations in planning a distributed teleradiology system. Telemed J. 1995 Spring;1(1):53-65. DOI: 10.1089/tmj.1.1995.1.53. PMID: 10165324.
• Sinha S, Sinha U, Czernin J, Porenta G, Schelbert HR. Noninvasive assessment of myocardial perfusion and metabolism: feasibility of registering gated MR and PET images. AJR Am J Roentgenol.1995 Feb;164(2):301-7. DOI: 10.2214/ajr.164.2.7839959. PMID: 7839959.

• Chu WW, leong IT, Taira RK. A semantic modeling approach for image retrieval by content. VLDB Journal 3, 445–477 (1994). DOI:10.1007/BF01231604.

• Huang HK, Taira RK, Lou SL, Wong AW, Breant C, Ho BK, Chuang KS, Stewart BK, Andriole K, Tecotzky R, et al. Implementation of a large-scale picture archiving and communication system. Comput Med Imaging Graph. 1993 Jan-Feb;17(1):1-11. DOI: 10.1016/0895-6111(93)90069-y. PMID: 8448760.

• Sinha S, Sinha U, Kangarloo H, Huang HK. Magnetic resonance image synthesis from analytic solutions of spin-echo and radio frequency-spoiled gradient-echo images. Invest Radiol. 1992 Oct;27(10):856-64. DOI: 10.1097/00004424-199210000-00017. PMID: 1399443.
• Sinha S, Sinha U, Kangarloo H, Huang HK. A PACS-based interactive teaching module for radiologic sciences. AJR Am J Roentgenol. 1992 Jul;159(1):199-205. DOI: 10.2214/ajr.159.1.1609698. PMID: 1609698.

• Kangarloo H. PACS–clinical experience at UCLA. Comput Med Imaging Graph. 1991 May-Jun;15(3):201-3. DOI: 10.1016/0895-6111(91)90011-j. PMID: 1913570.

• Huang HK, Kangarloo H, Cho PS, Taira RK, Ho BK, Chan KK. Planning a totally digital radiology department. AJR Am J Roentgenol. 1990 Mar;154(3):635-9. DOI: 10.2214/ajr.154.3.2106235. PMID: 2106235.

• Dietrich RB, Bradley WG, Zaragoza EJ, Otto RJ, Taira RK, Wilson GH, Kangarloo H. MR evaluation of early myelination patterns in normal and developmentally delayed infants. AJR Am J Roentgenol. 1988 Apr;150(4):889-96. DOI: 10.2214/ajr.150.4.889. PMID: 2450448